RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF880Q6PDB4 577 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 WFDC10BQ8IUB3 73 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 OR6M1Q8NGM8 313 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 OR13C3Q8NGS6 347 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 TEX47Q8TBZ9 253 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 ZNF556Q9HAH1 456 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 HLA-DRB4X5D2U9 266 aa4.33□□□□□ -1.72
CTNNA1-216ENST00000519489 OR4C45A6NMZ5 311 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 TNFRSF11BO00300 401 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 DENRO43583 198 aaKnown RBP4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 CA11O75493 328 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 ACTL6BO94805 426 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 CCNB2O95067 398 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 KRT8P05787 483 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 ELK1P19419 428 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 CDKN1BP46527 198 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 WHAMMP3Q1A5X7 153 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 ACOT6Q3I5F7 207 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 IGSF11Q5DX21 431 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 PARP16Q8N5Y8 322 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 UBAC2Q8NBM4 344 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 OR10W1Q8NGF6 305 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 OR4B1Q8NGF8 309 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 OR4C16Q8NGL9 310 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 PYURFQ96I23 114 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 GPER1Q99527 375 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 ROPN1BQ9BZX4 212 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 METTL9Q9H1A3 318 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 REEP1Q9H902 201 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 C21orf62Q9NYP8 219 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 AP3M1Q9Y2T2 418 aa4.32□□□□□ -1.72
CTNNA1-216ENST00000519489 GAGE12BA1L429 117 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 GAGE12HA6NDE8 117 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 ZAR1LA6NP61 321 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 H3BN98 237 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 NPPAP01160 153 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 FCER2P06734 321 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 CD3GP09693 182 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 BRWD1-AS2P59051 145 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 ACTR3P61158 418 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 ZNF85Q03923 595 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 COQ5Q5HYK3 327 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 GLYATQ6IB77 296 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 PUSL1Q8N0Z8 303 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 TMEM167AQ8TBQ9 72 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 ORAI1Q96D31 301 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 TMEM109Q9BVC6 243 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 OR51E2Q9H255 320 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 BANF2Q9H503 90 aa4.31□□□□□ -1.72
CTNNA1-216ENST00000519489 A0A1B0GU03 582 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 HELTA6NFD8 242 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 DIRC3C9JPN6 131 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 H3BNG1 76 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 PSCAO43653 123 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 PRKYO43930 277 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 DCTN3O75935 186 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 KBTBD11O94819 623 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 DHFRP00374 187 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 CST1P01037 141 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 FABP3P05413 133 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 CD5P06127 495 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 GTF2F2P13984 249 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 DUTP33316 252 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 DHRS2Q13268 280 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 RTL8BQ17RB0 113 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 Q56UQ5 140 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 AADACL4Q5VUY2 407 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 ARHGAP24Q8N264 748 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 MNS1Q8NEH6 495 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 OSR1Q8TAX0 266 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 LGALS12Q96DT0 336 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 C7orf50Q9BRJ6 194 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 HDHD3Q9BSH5 251 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 THTPAQ9BU02 230 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 NXF2Q9GZY0 626 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 SPACA1Q9HBV2 294 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 TAS2R4Q9NYW5 299 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 ABRACLQ9P1F3 81 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 EXOGQ9Y2C4 368 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 GOLT1BQ9Y3E0 138 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 LRRC42Q9Y546 428 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 LY96Q9Y6Y9 160 aa4.3□□□□□ -1.72
CTNNA1-216ENST00000519489 FAM90A26D6RGX4 464 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 CRXO43186 299 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 SULT1C4O75897 302 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 IGHV3-48P01763 117 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 ATP6V1B2P21281 511 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 NKX2-1P43699 371 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 PAX9P55771 341 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 SNRPGP62308 76 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 RPL30P62888 115 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 WT1-ASQ06250 92 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 LYPD5Q6UWN5 251 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 PQLC1Q8N2U9 271 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 LRTM2Q8N967 370 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms