RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 PTBP1P26599 531 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■■■□□ 16.9
CTNNA1-206ENST00000517980 LPAR6P43657 344 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 WT1-ASQ06250 92 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 DHRS11Q6UWP2 260 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 CD300LFQ8TDQ1 290 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
CTNNA1-206ENST00000517980 IGHV3OR16-8A0A075B7F1 116 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 OR2T8A6NH00 312 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 KRASP01116 189 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 RLN1P04808 185 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 SERPINE2P07093 398 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 C8orf88P0DMB2 117 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 MFAP2P55001 183 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 RBPMS2Q6ZRY4 209 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 IL17DQ8TAD2 202 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 FCAMRQ8WWV6 532 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 THYN1Q9P016 225 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 UBQLN2Q9UHD9 624 aa12.92□□□□□ -0.34
CTNNA1-206ENST00000517980 LOC102724200A0A096LPH7 203 aaPredicted RBP12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 TGOLN2O43493 480 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 F2RP25116 425 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 G6PCP35575 357 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 TAS2R20P59543 309 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 ANKRD55Q3KP44 614 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 SAMD12Q8N8I0 201 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 SRSF8Q9BRL6 282 aaKnown RBP12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
CTNNA1-206ENST00000517980 ERVK-16P61578 105 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 UBE2NLQ5JXB2 153 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 TMEM69Q5SWH9 247 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 LYSMD2Q8IV50 215 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 GDPD1Q8N9F7 314 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 OR1L6Q8NGR2 347 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 VN1R17PQ8TDU5 208 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 MOB3AQ96BX8 217 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 DGCR14Q96DF8 476 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 ZNF436Q9C0F3 470 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 NDUFA4L2Q9NRX3 87 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 OR51B2Q9Y5P1 312 aa12.9□□□□□ -0.34
CTNNA1-206ENST00000517980 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 JTBO76095 146 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 HLA-DMAP28067 261 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 KCTD21Q4G0X4 260 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 OR2C3Q8N628 320 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 OR6F1Q8NGZ6 308 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 MARC2Q969Z3 335 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 YIPF6Q96EC8 236 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 ANAPC10Q9UM13 185 aa12.89□□□□□ -0.35
CTNNA1-206ENST00000517980 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 SNAPC5O75971 98 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 NAT1P18440 290 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 PRSS3P35030 304 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 TSPAN14Q8NG11 270 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 F11RQ9Y624 299 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-206ENST00000517980 F8W735 103 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 GPR31O00270 319 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 CYB5BO43169 146 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 EIF4EP06730 217 aaKnown RBP12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 HRH1P35367 487 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 CROCCP3Q8IVE0 287 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 TMEM190Q8WZ59 177 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 C5orf66Q9H5L9 145 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
CTNNA1-206ENST00000517980 K7EIM0 57 aa12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 TMEM127O75204 238 aa12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 ADMP35318 185 aa12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 TAS2R46P59540 309 aa12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 EWSR1Q01844 656 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 Q56UQ5 140 aa12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 BSCL2Q96G97 398 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-206ENST00000517980 IGHV3-48P01763 117 aa12.85□□□□□ -0.35
CTNNA1-206ENST00000517980 FGF2P09038 288 aa12.85□□□□□ -0.35
CTNNA1-206ENST00000517980 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-206ENST00000517980 TSPAN5P62079 268 aa12.85□□□□□ -0.35
CTNNA1-206ENST00000517980 PMS2P11Q13670 270 aa12.85□□□□□ -0.35
CTNNA1-206ENST00000517980 THOC7Q6I9Y2 204 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-206ENST00000517980 HSD17B13Q7Z5P4 300 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms