RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 FABP9Q0Z7S8 132 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 TNFAIP8L3Q5GJ75 292 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 CLVS2Q5SYC1 327 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 UNQ6190/PRO20217Q6UXQ8 127 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 ZNF550Q7Z398 422 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 COMMD7Q86VX2 200 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 UMODL1-AS1Q8N2C9 162 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 TBC1D19Q8N5T2 526 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 TMEM156Q8N614 296 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 PACRGLQ8N7B6 248 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 MBD3L1Q8WWY6 194 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 ANAPC10Q9UM13 185 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 ANGPT4Q9Y264 503 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 ATP6V1DQ9Y5K8 247 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 ATG2BQ96BY7 2078 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 EP400Q96L91 3159 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 REREQ9P2R6 1566 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 STAB2Q8WWQ8 2551 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 REV3LO60673 3130 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 C9orf84Q5VXU9 1444 aa0.9□□□□□ -2.26
SKP1-203ENST00000517625 ASPMQ8IZT6 3477 aa0.9□□□□□ -2.26
SKP1-203ENST00000517625 TMEM269A0A1B0GVZ9 245 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 TRAPPC13A5PLN9 417 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 M0QZ92 97 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 CXCR6O00574 342 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 PLA2G10O15496 165 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 NOS1APO75052 506 aaPredicted RBP0.9□□□□□ -2.27
SKP1-203ENST00000517625 COX5BP10606 129 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 FGF6P10767 208 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 IL9P15248 144 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 NFYAP23511 347 aaPredicted RBP0.9□□□□□ -2.27
SKP1-203ENST00000517625 MSNP26038 577 aaKnown RBP0.9□□□□□ -2.27
SKP1-203ENST00000517625 CSN1S1P47710 185 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 MARCKSL1P49006 195 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 NNATQ16517 81 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 TMEM155Q4W5P6 130 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 SSX8Q7RTT4 187 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 HSPB9Q9BQS6 159 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 SOX21Q9Y651 276 aaPredicted RBP0.9□□□□□ -2.27
SKP1-203ENST00000517625 PXMP4Q9Y6I8 212 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 MAP3K5Q99683 1374 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 SONP18583 2426 aaKnown RBP0.9□□□□□ -2.27
SKP1-203ENST00000517625 CEP295Q9C0D2 2601 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 SPTAN1Q13813 2472 aaKnown RBP0.9□□□□□ -2.27
SKP1-203ENST00000517625 SSPOA2VEC9 5147 aa0.9□□□□□ -2.27
SKP1-203ENST00000517625 DCCP43146 1447 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 IGKV2-40A0A087WW87 121 aaPredicted RBP0.89□□□□□ -2.27
SKP1-203ENST00000517625 A0A0D9SEW6 157 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 TRBV6-5A0A0K0K1A5 114 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 H0Y980 276 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 H3BT86 120 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 LST1O00453 97 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 ACOX3O15254 700 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 NSA2O95478 260 aaKnown RBP0.89□□□□□ -2.27
SKP1-203ENST00000517625 IGKV2D-40P01614 121 aaPredicted RBP0.89□□□□□ -2.27
SKP1-203ENST00000517625 ISG15P05161 165 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 RPSAP08865 295 aaKnown RBP0.89□□□□□ -2.27
SKP1-203ENST00000517625 SRP19P09132 144 aaKnown RBP0.89□□□□□ -2.27
SKP1-203ENST00000517625 FAM228BP0C875 321 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 KCNE1P15382 129 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 GPX2P18283 190 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 CCL1P22362 96 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 RAB13P51153 203 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 FXYD2P54710 66 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 RAB5BP61020 215 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 ELOBQ15370 118 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 NDUFA5Q16718 116 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 Q1T7F1 81 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 SAPCD1Q5SSQ6 148 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 GLT8D1Q68CQ7 371 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 SLC36A1Q7Z2H8 476 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 GPR32P1Q8NGA4 272 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 C10orf105Q8TEF2 133 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 ACOT12Q8WYK0 555 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 RAB8BQ92930 207 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 OPTNQ96CV9 577 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 DIRAS2Q96HU8 199 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 Q96M85 177 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 RETNLBQ9BQ08 111 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 FAM96AQ9H5X1 160 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 COQ4Q9Y3A0 265 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 FAT4Q6V0I7 4981 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 LAMA3Q16787 3333 aa0.89□□□□□ -2.27
SKP1-203ENST00000517625 ARHGAP32A7KAX9 2087 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 SCAF11Q99590 1463 aaKnown RBP0.88□□□□□ -2.27
SKP1-203ENST00000517625 CENPFP49454 3210 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 NCKAP5O14513 1909 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 IGKV3D-7A0A0C4DH55 119 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 IGKV3OR2-268A0A0C4DH90 116 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 IRGMA1A4Y4 181 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 MEIS3P1A6NDR6 274 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 LEPROTO15243 131 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 DCTN3O75935 186 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 KRT7P08729 469 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 TFPTP0C1Z6 253 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 METTL15P1P0C7V9 234 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 SULT1A3P0DMM9 295 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 SULT1A4P0DMN0 295 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 S100A7P31151 101 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 BLVRAP53004 296 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms