RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SPATA25Q9BR10 227 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 NDUFA4L2Q9NRX3 87 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 FAM212BQ9NTI7 297 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 TNCP24821 2201 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 KRASP01116 189 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 SERPINE2P07093 398 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 CD7P09564 240 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 TRAPPC2P0DI81 140 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 TRAPPC2BP0DI82 140 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 CBLN1P23435 193 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 PTBP1P26599 531 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 GPR183P32249 361 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 G6PCP35575 357 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 RORCP51449 518 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 CTF1Q16619 201 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 FAM106AQ4KMX7 169 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 CASC10Q5T4H9 136 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 LPCAT3Q6P1A2 487 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 LINC00322Q6ZN03 302 aaPredicted RBP7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 OR1L8Q8NGR8 309 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 NEURL2Q9BR09 285 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 NAA50Q9GZZ1 169 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 TUBA4BQ9H853 241 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 EDA2RQ9HAV5 297 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 PLEKHA3Q9HB20 300 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 SLC2A8Q9NY64 477 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 THYN1Q9P016 225 aa7.88□□□□□ -1.15
HMGXB3-205ENST00000514469 SORL1Q92673 2214 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 SACSQ9NZJ4 4579 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 C15orf61A6NNL5 157 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 CYB5BO43169 146 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 TPPPO94811 219 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 CLEC3BP05452 202 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 OR13C7P0DN81 318 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 MFAP2P55001 183 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 UCP3P55916 312 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 TSPAN5P62079 268 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 PHLDA2Q53GA4 152 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 UNQ9165/PRO28630Q6UXU0 137 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 TBC1D26Q86UD7 250 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 SLC38A6Q8IZM9 456 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 OR5B3Q8NH48 314 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 VN1R17PQ8TDU5 208 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 AP3S1Q92572 193 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 TSC22D3Q99576 134 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF436Q9C0F3 470 aaPredicted RBP7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 TMEM14BQ9NUH8 114 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 MLXQ9UH92 298 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 PRNDQ9UKY0 176 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 NSG2Q9Y328 171 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 OR51B2Q9Y5P1 312 aa7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 F11RQ9Y624 299 aaKnown RBP7.87□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF320A2RRD8 509 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 DBX1A6NMT0 343 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 TGOLN2O43493 480 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 SNAPC5O75971 98 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 IGKV1-39P01597 117 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 IGKV1D-39P04432 117 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 C8orf88P0DMB2 117 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 S100GP29377 79 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 ELLP55199 621 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 GUCA2BQ16661 112 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF57Q68EA5 555 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 MZT2AQ6P582 158 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 DEFB125Q8N687 156 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 TMEM190Q8WZ59 177 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 MARC2Q969Z3 335 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 ISOC1Q96CN7 298 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 BSCL2Q96G97 398 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 SEC22AQ96IW7 307 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 ATP6V0BQ99437 205 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 PALMDQ9NP74 551 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 CEPT1Q9Y6K0 416 aa7.86□□□□□ -1.15
HMGXB3-205ENST00000514469 OR2T8A6NH00 312 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 FAM25AB3EWG3 89 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 FAM25CB3EWG5 89 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 FAM25GB3EWG6 89 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 F8W735 103 aaPredicted RBP7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 K7EIM0 57 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 M0QYG6 137 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 LYL1P12980 280 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF182P17025 639 aaPredicted RBP7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 TBPP20226 339 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 RND3P61587 244 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 TM4SF20Q53R12 229 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 RNASE12Q5GAN4 147 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 PLET1Q6UQ28 207 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 BTNL8Q6UX41 500 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 ARRDC1Q8N5I2 433 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 UXS1Q8NBZ7 420 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF486Q96H40 463 aaPredicted RBP7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 TMEM56Q96MV1 263 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 HINT2Q9BX68 163 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 MRPS26Q9BYN8 205 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 HIPK2Q9H2X6 1198 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms