RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 C15orf61A6NNL5 157 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 RBMXL2O75526 392 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 SNAPC5O75971 98 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 SFT2D2O95562 160 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 CDS2O95674 445 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 HLA-AP01891 365 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 OR4E1P0C645 316 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 P0C879 139 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 ANXA3P12429 323 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 PPIFP30405 207 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 CRIP2P52943 208 aaPredicted RBP7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 DHODHQ02127 395 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 DHRS2Q13268 280 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM128Q5BJH2 165 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 C11orf87Q6NUJ2 197 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 Q6ZRM9 215 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 LYZL2Q7Z4W2 148 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 OR10W1Q8NGF6 305 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 OR4X2Q8NGF9 303 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 OR4A5Q8NH83 315 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 SEC22CQ9BRL7 303 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 COA4Q9NYJ1 87 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 KCNIP3Q9Y2W7 256 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 OR51B2Q9Y5P1 312 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 NUBP2Q9Y5Y2 271 aa7.66□□□□□ -1.18
TOPBP1-209ENST00000513818 TEX50A0A1B0GTY4 177 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 TCRBV4S1A1TA0A5B7 111 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 C9orf170A2RU37 121 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 ADARB2-AS1A8MUL3 147 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 TSPAN15O95858 294 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 H2AFB2P0C5Z0 115 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 SHISA2Q6UWI4 295 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 LYG2Q86SG7 212 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 FAM219AQ8IW50 185 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 LGI3Q8N145 548 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 MINDY2Q8NBR6 621 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 OR4A16Q8NH70 328 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 SPATA3Q8NHX4 192 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 GPR146Q96CH1 333 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 RRNAD1Q96FB5 475 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM56Q96MV1 263 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 OR5B12Q96R08 314 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 SPIN2AQ99865 258 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 SPIN2BQ9BPZ2 258 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 AIFM2Q9BRQ8 373 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 COMMD5Q9GZQ3 224 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 ZNF355PQ9NSJ1 428 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 CACNG5Q9UF02 275 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM56-RWDD3S4R434 201 aa7.65□□□□□ -1.18
TOPBP1-209ENST00000513818 TRRAPQ9Y4A5 3859 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 VWFP04275 2813 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 A0A0B4J293 547 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 IGLC7A0M8Q6 106 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 ST8SIA3O43173 380 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 ADAP1O75689 374 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 B3GALNT1O75752 331 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 IGHG4P01861 327 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 HOXB5P09067 269 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 PSMB8P28062 276 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 MAS1LP35410 378 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 TPPP2P59282 170 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 DEFA1P59665 94 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 DEFA3P59666 94 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 CD83Q01151 205 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 TMEM267Q0VDI3 215 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 DEFB136Q30KP8 78 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 CXorf66Q5JRM2 361 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 FAM209BQ5JX69 171 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 TEX38Q6PEX7 206 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 KLHL30-AS1Q8NEE0 82 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 FAM110DQ8TAY7 271 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 DUX3Q96PT4 197 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 GNB4Q9HAV0 340 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 TMEM14BQ9NUH8 114 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 PRNDQ9UKY0 176 aa7.64□□□□□ -1.19
TOPBP1-209ENST00000513818 A0A0B4J2A0 478 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 MPTX1A8MV57 137 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 NUDT19A8MXV4 375 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 CCSO14618 274 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 ATG12O94817 140 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 IGHV3-11P01762 117 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 TRGV3P03979 118 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 TRAPPC2P0DI81 140 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 TRAPPC2BP0DI82 140 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 RPL23AP62750 156 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 SRPXP78539 464 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 WT1-ASQ06250 92 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 FOXE3Q13461 319 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 AKIRIN2Q53H80 203 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 NMSQ5H8A3 153 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 C8orf86Q6ZUL3 223 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 OR1L8Q8NGR8 309 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 IL22RA2Q969J5 263 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 GON7Q9BXV9 100 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 ALX4Q9H161 411 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 SHPKQ9UHJ6 478 aa7.63□□□□□ -1.19
TOPBP1-209ENST00000513818 S4R3C0 116 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms