RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 H2AFB1P0C5Y9 115 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 NPY1RP25929 384 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 CD1BP29016 333 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 REG1BP48304 166 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 RAB2AP61019 212 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 ARF6P62330 175 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 PEA15Q15121 130 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 MRGPRG-AS1Q2M3A8 158 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 TMEM41BQ5BJD5 291 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 MINOS1Q5TGZ0 78 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 PVRIGQ6DKI7 326 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
RNF4-220ENST00000513578 MMD2Q8IY49 270 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 PNKDQ8N490 385 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 CLDND2Q8NHS1 167 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 FAM213BQ8TBF2 198 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 RPEQ96AT9 228 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 RBMXL1Q96E39 390 aaKnown RBP6.75□□□□□ -1.33
RNF4-220ENST00000513578 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 COMMD5Q9GZQ3 224 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 NPVFQ9HCQ7 196 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 RPRMQ9NS64 109 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 KIAA1456Q9P272 454 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 FBXO7Q9Y3I1 522 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 MINOS1-NBL1R4GNA1 71 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 UBE2L5PA0A1B0GUS4 154 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 FAM157AC9JC47 383 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 TSPAN9O75954 239 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 CA2P00918 260 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 RNF224P0DH78 156 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 RNASE2P10153 161 aaKnown RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 FGF7P21781 194 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 COX7A1P24310 79 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 ZFP36P26651 326 aaKnown RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 GPX4P36969 197 aaPredicted RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 FHITP49789 147 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 ERHP84090 104 aaKnown RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 ZNF616Q08AN1 781 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 PSG5Q15238 335 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 GUK1Q16774 197 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 TMEM249Q2WGJ8 235 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 SPINK9Q5DT21 86 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 CACNG8Q8WXS5 425 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 CFHR4Q92496 578 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 CCL19Q99731 98 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 SRSF8Q9BRL6 282 aaKnown RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 RSG1Q9BU20 258 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 PBDC1Q9BVG4 233 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 NPCDR1Q9BY65 106 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 BPESC1Q9GZL8 116 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 KCNIP2Q9NS61 270 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 TBL2Q9Y4P3 447 aaKnown RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 LSM4Q9Y4Z0 139 aaKnown RBP6.74□□□□□ -1.33
RNF4-220ENST00000513578 RFNGQ9Y644 331 aa6.74□□□□□ -1.33
RNF4-220ENST00000513578 CGB1A6NKQ9 187 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 IFNA4P05014 189 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 M6PRP20645 277 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 OPRK1P41145 380 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 COMPP49747 757 aaPredicted RBP6.73□□□□□ -1.33
RNF4-220ENST00000513578 DSCR9P59020 149 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
RNF4-220ENST00000513578 EBI3Q14213 229 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 PRSS8Q16651 343 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 LDLRAD2Q5SZI1 272 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 CCDC144NLQ6NUI1 221 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 MOB3BQ86TA1 216 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 ZNF709Q8N972 641 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 ZNF114Q8NC26 417 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 NPBQ8NG41 125 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 RNASEH2CQ8TDP1 164 aaKnown RBP6.73□□□□□ -1.33
RNF4-220ENST00000513578 C10orf105Q8TEF2 133 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 PIMREGQ9BSJ6 248 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 ZNF430Q9H8G1 570 aaPredicted RBP6.73□□□□□ -1.33
RNF4-220ENST00000513578 SIGLEC9Q9Y336 463 aa6.73□□□□□ -1.33
RNF4-220ENST00000513578 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
RNF4-220ENST00000513578 CTXND1A0A1B0GTU2 59 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 SEC14L6B5MCN3 397 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 CYB5BO43169 146 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 SLC25A17O43808 307 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 NDUFA3O95167 84 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 VENTXO95231 258 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 MYOD1P15172 320 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 HOXB4P17483 251 aaPredicted RBP6.72□□□□□ -1.33
RNF4-220ENST00000513578 ADCYAP1P18509 176 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 TAGLN2P37802 199 aaKnown RBP6.72□□□□□ -1.33
RNF4-220ENST00000513578 UBE2E1P51965 193 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 SUB1P53999 127 aaKnown RBP eCLIP6.72□□□□□ -1.33
RNF4-220ENST00000513578 CD69Q07108 199 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 ZNF726P1Q15940 193 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
RNF4-220ENST00000513578 KHDC3LQ587J8 217 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 ZNF506Q5JVG8 444 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 ACSM6Q6P461 480 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 TMEM144Q7Z5S9 345 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 OR10G4Q8NGN3 311 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 FAM168AQ92567 244 aa6.72□□□□□ -1.33
RNF4-220ENST00000513578 RCC1LQ96I51 464 aaKnown RBP6.72□□□□□ -1.33
RNF4-220ENST00000513578 RITA1Q96K30 269 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms