RNA–Protein interactions for RNA: ENST00000513325.5

HERC3-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-211ENST00000513325 TGOLN2O43493 480 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 TRAPPC2P0DI81 140 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 TRAPPC2BP0DI82 140 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 OR13C7P0DN81 318 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 HERV-K104P61576 105 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 VN1R17PQ8TDU5 208 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 ZNF436Q9C0F3 470 aaPredicted RBP12.62□□□□□ -0.39
HERC3-211ENST00000513325 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 COMMD9Q9P000 198 aa12.62□□□□□ -0.39
HERC3-211ENST00000513325 XRCC3O43542 346 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 SERPINE2P07093 398 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 FGF2P09038 288 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 ERVK-16P61578 105 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 WT1-ASQ06250 92 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 BORCS5Q969J3 196 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 C5orf66Q9H5L9 145 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 IFT46Q9NQC8 304 aa12.61□□□□□ -0.39
HERC3-211ENST00000513325 OR2T8A6NH00 312 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 CYB5BO43169 146 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 PGLYRP1O75594 196 aaPredicted RBP12.6□□□□□ -0.39
HERC3-211ENST00000513325 RLN1P04808 185 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 F2RP25116 425 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 LPAR6P43657 344 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 RFX2P48378 723 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 MFAP2P55001 183 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 THOC7Q6I9Y2 204 aaKnown RBP12.6□□□□□ -0.39
HERC3-211ENST00000513325 DHRS11Q6UWP2 260 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 HSD17B13Q7Z5P4 300 aaPredicted RBP12.6□□□□□ -0.39
HERC3-211ENST00000513325 SLC38A6Q8IZM9 456 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 OR2C3Q8N628 320 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 OR1L8Q8NGR8 309 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 MOB3AQ96BX8 217 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 S100A16Q96FQ6 103 aaKnown RBP12.6□□□□□ -0.39
HERC3-211ENST00000513325 ZNF2Q9BSG1 426 aaPredicted RBP12.6□□□□□ -0.39
HERC3-211ENST00000513325 HINT2Q9BX68 163 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 UBQLN2Q9UHD9 624 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 BIRC6Q9NR09 4857 aa12.6□□□□□ -0.39
HERC3-211ENST00000513325 IGHV3-21A0A0B4J1V1 117 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 TMEM127O75204 238 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 KRASP01116 189 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 PMP2P02689 132 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 TGFBR1P36897 503 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 FCAMRQ8WWV6 532 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
HERC3-211ENST00000513325 NDUFA4L2Q9NRX3 87 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 NSG2Q9Y328 171 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 HYDINQ4G0P3 5121 aa12.59□□□□□ -0.39
HERC3-211ENST00000513325 PLECQ15149 4684 aaKnown RBP12.58□□□□□ -0.4
HERC3-211ENST00000513325 G6PCP35575 357 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 CROCCP3Q8IVE0 287 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 SCARB1Q8WTV0 552 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 DGCR14Q96DF8 476 aaKnown RBP12.58□□□□□ -0.4
HERC3-211ENST00000513325 BSCL2Q96G97 398 aaPredicted RBP12.58□□□□□ -0.4
HERC3-211ENST00000513325 CHRDL1Q9BU40 450 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 C20orf24Q9BUV8 137 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 DAZ1Q9NQZ3 744 aaKnown RBP12.58□□□□□ -0.4
HERC3-211ENST00000513325 C21orf62Q9NYP8 219 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 ANAPC10Q9UM13 185 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 OR51B2Q9Y5P1 312 aa12.58□□□□□ -0.4
HERC3-211ENST00000513325 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
HERC3-211ENST00000513325 IGHV3OR16-8A0A075B7F1 116 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 NDUFA4O00483 81 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 TSPAN4O14817 238 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 SNAPC5O75971 98 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 APOC4P55056 127 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 UBE2NLQ5JXB2 153 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 TMEM69Q5SWH9 247 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 LAMTOR1Q6IAA8 161 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 SAMD12Q8N8I0 201 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 OR5H2Q8NGV7 314 aa12.57□□□□□ -0.4
HERC3-211ENST00000513325 LSM10Q969L4 123 aaKnown RBP12.57□□□□□ -0.4
HERC3-211ENST00000513325 A0A0J9YWU9 116 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 CXorf65A6NEN9 183 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 F8W735 103 aaPredicted RBP12.56□□□□□ -0.4
HERC3-211ENST00000513325 SPRY2O43597 315 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 ZNF207O43670 478 aaKnown RBP12.56□□□□□ -0.4
HERC3-211ENST00000513325 NAT1P18440 290 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 ADMP35318 185 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 RPS19P39019 145 aaKnown RBP12.56□□□□□ -0.4
HERC3-211ENST00000513325 TAS2R46P59540 309 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 TAS2R20P59543 309 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.4
HERC3-211ENST00000513325 PMS2P11Q13670 270 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 Q6ZWC4 215 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 TSPAN14Q8NG11 270 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 FXYD6Q9H0Q3 95 aa12.56□□□□□ -0.4
HERC3-211ENST00000513325 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 K7EIM0 57 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 K7EMT4 169 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 GPR31O00270 319 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 DEFB135Q30KP9 77 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 ODF3L2Q3SX64 289 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms