RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 OR10A7Q8NGE5 316 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 OR51D1Q8NGF3 324 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 OR52M1Q8NGK5 317 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 OR2T10Q8NGZ9 312 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 KCNG3Q8TAE7 436 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 GALMQ96C23 342 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 RBM14Q96PK6 669 aaKnown RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 ZNF251Q9BRH9 671 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 UQCC2Q9BRT2 126 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 TMEM59Q9BXS4 323 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 GON7Q9BXV9 100 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 TAF9BQ9HBM6 251 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 PLEKHJ1Q9NW61 149 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 GHRLQ9UBU3 117 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 RNF24Q9Y225 148 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 LRRC42Q9Y546 428 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 RBM7Q9Y580 266 aaKnown RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 TSSC4Q9Y5U2 329 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 MXRA5Q9NR99 2828 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 ARHGAP32A7KAX9 2087 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 A0A075B6Q4 140 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 IGHV1-3A0A0C4DH29 117 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 C12orf77C9JDV5 145 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 G3V4G9 280 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 H7C2Y5 167 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 GPX5O75715 221 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 MOSP00540 346 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 IGLV1-47P01700 117 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 CD3GP09693 182 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 RCC1P18754 421 aaPredicted RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 SRMP19623 302 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 VDAC1P21796 283 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 GADD45AP24522 165 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 CALRP27797 417 aaKnown RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 PSMB9P28065 219 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 CD40LGP29965 261 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 BLVRBP30043 206 aaPredicted RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 MAP2K4P45985 399 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 PSMD7P51665 324 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 RPS11P62280 158 aaKnown RBP eCLIP2.69□□□□□ -1.98
NUP54-212ENST00000513248 RPS25P62851 125 aaKnown RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 SLC35A2P78381 396 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 ZNF816Q0VGE8 651 aaPredicted RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 CBX3Q13185 183 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 ARFRP1Q13795 201 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 DIAPH2-AS1Q14236 149 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 INSL4Q14641 139 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 MMDQ15546 238 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 DEFB121Q5J5C9 76 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 LDLRAD2Q5SZI1 272 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 FAM27D1Q5T7N8 215 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 HES5Q5TA89 166 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 ATRAIDQ6UW56 229 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 UNQ9370/PRO34162Q6UXP9 181 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 ASCL4Q6XD76 172 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 C6orf201Q7Z4U5 140 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 LINC00518Q8N0U6 118 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 Q8N2B8 174 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 KLHL30-AS1Q8NEE0 82 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 OR1L1Q8NH94 360 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 PIFOQ8TCI5 191 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 PHYHIPQ92561 330 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 PGLYRP3Q96LB9 341 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 MGLLQ99685 303 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 CMSS1Q9BQ75 279 aaKnown RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 FAAP24Q9BTP7 215 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 GPR61Q9BZJ8 451 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 NCOR1P1Q9H4R4 102 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 PARP11Q9NR21 331 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 LINC00527Q9UJ94 153 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 ZNF221Q9UK13 617 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 AK6Q9Y3D8 172 aaKnown RBP2.69□□□□□ -1.98
NUP54-212ENST00000513248 V9GY05 133 aa2.69□□□□□ -1.98
NUP54-212ENST00000513248 FAM168BA1KXE4 195 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 METTL21EPA6NDL7 271 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 KLLNB2CW77 178 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 LY6LH3BQJ8 138 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 C15orf65H3BRN8 121 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 SLC17A2O00624 439 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 BET1O15155 118 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 PIN1P1O15428 100 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 SLC31A2O15432 143 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 FGF16O43320 207 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 DENRO43583 198 aaKnown RBP2.68□□□□□ -1.98
NUP54-212ENST00000513248 APOA2P02652 100 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 PRB2P02812 416 aaPredicted RBP2.68□□□□□ -1.98
NUP54-212ENST00000513248 UCHL1P09936 223 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 OR5H8P0DN80 308 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 AREGP15514 252 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 IGLL1P15814 213 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 ZBTB25P24278 435 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 CRHBPP24387 322 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 UCP1P25874 307 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 CD1BP29016 333 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 SOX6P35712 828 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 PPP1CCP36873 323 aaKnown RBP2.68□□□□□ -1.98
NUP54-212ENST00000513248 CEACAM6P40199 344 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 CLDN12P56749 244 aa2.68□□□□□ -1.98
NUP54-212ENST00000513248 MLLT11Q13015 90 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 498.8 ms