RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 PRO1933Q9H354 126 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 RAB9BQ9NP90 201 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 PUS1Q9Y606 427 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGCL-209ENST00000513148 TRBV6-6A0A0A6YYG2 114 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 F2RL2O00254 374 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 HSD17B6O14756 317 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 HSPB1P04792 205 aaKnown RBP13.35□□□□□ -0.27
HMGCL-209ENST00000513148 CXCL1P09341 107 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 LOXL3P58215 753 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 GNMTQ14749 295 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 FAM219AQ8IW50 185 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 OR10A7Q8NGE5 316 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 OR52L2PQ8NGH6 319 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 GALMQ96C23 342 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 TVP23CQ96ET8 276 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGCL-209ENST00000513148 PSG11Q9UQ72 335 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 MMP24Q9Y5R2 645 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 M0QZK8 103 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 PHOX2AO14813 284 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 GPR137BO60478 399 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 GGCTO75223 188 aaKnown RBP13.34□□□□□ -0.27
HMGCL-209ENST00000513148 TRGC2P03986 189 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 SCTP09683 121 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 TRGC1P0CF51 173 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 GZMBP10144 247 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 UBE2KP61086 200 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 DLK1P80370 383 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 LDLRAD2Q5SZI1 272 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 TMEM183AQ8IXX5 376 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 OR4P4Q8NGL7 312 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 ABHD5Q8WTS1 349 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 TNFRSF19Q9NS68 423 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 GSKIPQ9P0R6 139 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 FBXO7Q9Y3I1 522 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 RBFOX3A6NFN3 312 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 TCF21O43680 179 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 IFNA21P01568 189 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 OR13C7P0DN81 318 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 PPP1CCP36873 323 aaKnown RBP13.34□□□□□ -0.27
HMGCL-209ENST00000513148 IAH1Q2TAA2 248 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-209ENST00000513148 OR9G1Q8NH87 305 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 ST6GALNAC5Q9BVH7 336 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 KIAA1456Q9P272 454 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 HILPDAQ9Y5L2 63 aa13.34□□□□□ -0.27
HMGCL-209ENST00000513148 C2CD3Q4AC94 2353 aa13.33□□□□□ -0.27
HMGCL-209ENST00000513148 TRBV24-1A0A075B6N3 115 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 MBP02144 154 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 PRRX1P54821 245 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 TAS2R46P59540 309 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 HLA-DRB5Q30154 266 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 GFI1BQ5VTD9 330 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 OR52M1Q8NGK5 317 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 AJUBAQ96IF1 538 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
HMGCL-209ENST00000513148 J3QR06 171 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 IGLV1-47P01700 117 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 SRP19P09132 144 aaKnown RBP13.32□□□□□ -0.28
HMGCL-209ENST00000513148 HTR1DP28221 377 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-209ENST00000513148 AADACL3Q5VUY0 350 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 DYNAPQ8N1N2 210 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 OR5H2Q8NGV7 314 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 TBL2Q9Y4P3 447 aaKnown RBP13.32□□□□□ -0.28
HMGCL-209ENST00000513148 TRDCB7Z8K6 153 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 M0R143 59 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 CYB5BO43169 146 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 HOXA3O43365 443 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-209ENST00000513148 DFFBO76075 338 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 PRH1P02810 166 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 OR10X1Q8NGY0 326 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 NIPSNAP3BQ9BS92 247 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 VAX2Q9UIW0 290 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 JPT1Q9UK76 154 aa13.32□□□□□ -0.28
HMGCL-209ENST00000513148 IGKV1D-8A0A087WSZ0 117 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 DNAJC9-AS1A6NH13 148 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 HSPA12AO43301 675 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 VENTXO95231 258 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 DTYMKP23919 212 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 RIPPLY3P57055 190 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 HILS1P60008 231 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 HTD2P86397 168 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 HAGHQ16775 308 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 Q6YL49 198 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 SGPP2Q8IWX5 399 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 FRZBQ92765 325 aa13.31□□□□□ -0.28
HMGCL-209ENST00000513148 IGKV1-6A0A0C4DH72 117 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 BUB1B-PAK6H3BSN5 160 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 IGHV4-59P01825 116 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 KIR2DS4P43632 304 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 KIR2DS1Q14954 304 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 HERPUD1Q15011 391 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 TMEM30BQ3MIR4 351 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 MORN2Q502X0 79 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms