RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TNFRSF9Q07011 255 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 TMEM69Q5SWH9 247 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 LYSMD2Q8IV50 215 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 CADM3Q8N126 398 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 BORCS5Q969J3 196 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
VEGFA-216ENST00000512683 FUNDC2Q9BWH2 189 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 VCX3AQ9NNX9 186 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 IFT46Q9NQC8 304 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 EHFQ9NZC4 300 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 HPRT1P00492 218 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 PMP2P02689 132 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 OR2B8PP59922 312 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 PLECQ15149 4684 aaKnown RBP9.39□□□□□ -0.91
VEGFA-216ENST00000512683 TM4SF20Q53R12 229 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 LAMTOR1Q6IAA8 161 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 OR2C3Q8N628 320 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 TMEM217Q8N7C4 229 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 OR1L6Q8NGR2 347 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 OR51H1Q8NH63 302 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 VN1R17PQ8TDU5 208 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 MOB3AQ96BX8 217 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 PLEKHA2Q9HB19 425 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 MLXQ9UH92 298 aa9.39□□□□□ -0.91
VEGFA-216ENST00000512683 UPK2O00526 184 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 TSPAN4O14817 238 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 S1PR2O95136 353 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 REG1AP05451 166 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 NQO2P16083 231 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 PRSS3P35030 304 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 CMC4P56277 68 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-216ENST00000512683 HERV-K104P61576 105 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 VBP1P61758 197 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 CATR1Q13166 79 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 PLET1Q6UQ28 207 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 ZNF502Q8TBZ5 544 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 GPX8Q8TED1 209 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 LINC00476Q8WZB0 136 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 ZNF2Q9BSG1 426 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-216ENST00000512683 ZNF436Q9C0F3 470 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-216ENST00000512683 COMMD5Q9GZQ3 224 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 HRASLSQ9HDD0 168 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 KLK5Q9Y337 293 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-216ENST00000512683 S4R3C0 116 aa9.38□□□□□ -0.91
VEGFA-216ENST00000512683 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 SPRY2O43597 315 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 PGLYRP1O75594 196 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-216ENST00000512683 IGHV3-23P01764 117 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 APOA1P02647 267 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 EDN2P20800 178 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 TAS2R46P59540 309 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 ZNF585BQ52M93 769 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 AADACL3Q5VUY0 350 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 SPSB3Q6PJ21 355 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-216ENST00000512683 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 CMTM3Q96MX0 182 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 FXYD6Q9H0Q3 95 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 COMMD3Q9UBI1 195 aa9.37□□□□□ -0.91
VEGFA-216ENST00000512683 K7EMT4 169 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
VEGFA-216ENST00000512683 RLN1P04808 185 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 SMIM18P0DKX4 95 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 RPA2P15927 270 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 ELK1P19419 428 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 F2RP25116 425 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 HRH1P35367 487 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 BTNL8Q6UX41 500 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 OR10W1Q8NGF6 305 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 FCAMRQ8WWV6 532 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 CACNG8Q8WXS5 425 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 NAA50Q9GZZ1 169 aaKnown RBP9.36□□□□□ -0.91
VEGFA-216ENST00000512683 DAZ1Q9NQZ3 744 aaKnown RBP9.36□□□□□ -0.91
VEGFA-216ENST00000512683 COMMD9Q9P000 198 aa9.36□□□□□ -0.91
VEGFA-216ENST00000512683 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 OR4C46A6NHA9 309 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 TGOLN2O43493 480 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 HPGDSO60760 199 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 HLA-DMAP28067 261 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 LPAR6P43657 344 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 CTF1Q16619 201 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 UNQ9165/PRO28630Q6UXU0 137 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 STPG3Q8N7X2 389 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 OR6F1Q8NGZ6 308 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 RNF183Q96D59 192 aa9.35□□□□□ -0.91
VEGFA-216ENST00000512683 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
VEGFA-216ENST00000512683 BSCL2Q96G97 398 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-216ENST00000512683 QTRT1Q9BXR0 403 aaKnown RBP9.35□□□□□ -0.91
VEGFA-216ENST00000512683 C6orf62Q9GZU0 229 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms