RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 MT-CO2P00403 227 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 PSMB3P49720 205 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 CCL8P80075 99 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 GUCA2BQ16661 112 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 FAM122CQ6P4D5 195 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 CENPVQ7Z7K6 275 aaPredicted RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 OR4A5Q8NH83 315 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 OSR1Q8TAX0 266 aaPredicted RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 TNFRSF14Q92956 283 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 TMEM186Q96B77 213 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 OR4C12Q96R67 309 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 IFI27L2Q9H2X8 130 aa7.78□□□□□ -1.16
MSH3-203ENST00000512531 CISD1Q9NZ45 108 aaKnown RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 RPUSD1Q9UJJ7 312 aaKnown RBP7.78□□□□□ -1.16
MSH3-203ENST00000512531 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
MSH3-203ENST00000512531 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 LINC00473A8K010 186 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 FNDC10F2Z333 226 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 CD5LO43866 347 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 IFNA4P05014 189 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 MC5RP33032 325 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 RAB5BP61020 215 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.17
MSH3-203ENST00000512531 DLK1P80370 383 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 POU2AF1Q16633 256 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 CLEC12BQ2HXU8 276 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 AVPI1Q5T686 147 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 HEPN1Q6WQI6 88 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 ETV3LQ6ZN32 361 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 SLC25A48Q6ZT89 311 aaKnown RBP7.77□□□□□ -1.17
MSH3-203ENST00000512531 OR10X1Q8NGY0 326 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 H1FXQ92522 213 aaKnown RBP7.77□□□□□ -1.17
MSH3-203ENST00000512531 CCL17Q92583 94 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 TVP23CQ96ET8 276 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 TIMD4Q96H15 378 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 PCGF1Q9BSM1 259 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 MS4A7Q9GZW8 240 aaPredicted RBP7.77□□□□□ -1.17
MSH3-203ENST00000512531 RAB1BQ9H0U4 201 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 PLEKHA3Q9HB20 300 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 SLC35D1Q9NTN3 355 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 KAAG1Q9UBP8 84 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 VAX2Q9UIW0 290 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 FOXA2Q9Y261 457 aaPredicted RBP7.77□□□□□ -1.17
MSH3-203ENST00000512531 ZNF257Q9Y2Q1 563 aa7.77□□□□□ -1.17
MSH3-203ENST00000512531 SAA2-SAA4A0A096LPE2 208 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 IGHV1-69-2A0A0G2JMI3 117 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 A0A1W2PN81 502 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 A0A1W2PPV4 95 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 SMCO3A2RU48 225 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 C15orf61A6NNL5 157 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 TGOLN2O43493 480 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 MT-ND4LP03901 98 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 SAA2P0DJI9 122 aaPredicted RBP7.76□□□□□ -1.17
MSH3-203ENST00000512531 CGB3P0DN86 165 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 CGB7P0DN87 165 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 BCL2P10415 239 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 ADCYAP1P18509 176 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 CD1BP29016 333 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 CHRNA7P36544 502 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 SUB1P53999 127 aaKnown RBP eCLIP7.76□□□□□ -1.17
MSH3-203ENST00000512531 PRRX1P54821 245 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 ERHP84090 104 aaKnown RBP7.76□□□□□ -1.17
MSH3-203ENST00000512531 SRSF3P84103 164 aaKnown RBP7.76□□□□□ -1.17
MSH3-203ENST00000512531 RUNX1Q01196 453 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 IZUMO4Q1ZYL8 232 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 VWC2Q2TAL6 325 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 RNF212Q495C1 297 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 SLC35E3Q7Z769 313 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 OR5B3Q8NH48 314 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 LHX4Q969G2 390 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 DCTN5Q9BTE1 182 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 QTRT1Q9BXR0 403 aaKnown RBP7.76□□□□□ -1.17
MSH3-203ENST00000512531 NPVFQ9HCQ7 196 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 SIRT7Q9NRC8 400 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 GNG13Q9P2W3 67 aa7.76□□□□□ -1.17
MSH3-203ENST00000512531 AMMECR1Q9Y4X0 333 aaPredicted RBP7.76□□□□□ -1.17
MSH3-203ENST00000512531 NBEAL1Q6ZS30 2694 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 A0A087WWC5 75 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 A0A1B0GV50 99 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 CXorf65A6NEN9 183 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 C1orf196B1AJZ1 125 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 NUPL2O15504 423 aaKnown RBP7.75□□□□□ -1.17
MSH3-203ENST00000512531 SNRNP70P08621 437 aaKnown RBP7.75□□□□□ -1.17
MSH3-203ENST00000512531 OR13C7P0DN81 318 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 USF1P22415 310 aaPredicted RBP7.75□□□□□ -1.17
MSH3-203ENST00000512531 FHITP49789 147 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 GNG10P50151 68 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 PPOXP50336 477 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 HNF4GQ14541 408 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 HAGHQ16775 308 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 AKIRIN2Q53H80 203 aa7.75□□□□□ -1.17
MSH3-203ENST00000512531 AWAT1Q58HT5 328 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms