RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PTCRAQ6ISU1 281 aaPredicted RBP7.16□□□□□ -1.26
HTT-208ENST00000510626 OSR1Q8TAX0 266 aaPredicted RBP7.16□□□□□ -1.26
HTT-208ENST00000510626 CT62P0C5K7 136 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 GLRX5Q86SX6 157 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 TCF19Q9Y242 345 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 MT-CO3P00414 261 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 IGHV5-51A0A0C4DH38 117 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 A0A1W2PRE2 83 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
HTT-208ENST00000510626 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 OR52M1Q8NGK5 317 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 PRR13Q9NZ81 148 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 KLF2Q9Y5W3 355 aaPredicted RBP7.16□□□□□ -1.26
HTT-208ENST00000510626 COLCA2A8K830 154 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 LYL1P12980 280 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 HIGD1CA8MV81 97 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 DPM2O94777 84 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 Q5BKY6 102 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 ATP5G1P05496 136 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 ATP5G3P48201 142 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 ATP5G2Q06055 141 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 MMDQ15546 238 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 CCL17Q92583 94 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 LINC00470Q9BZP3 86 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 ZNF83P51522 516 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 KRTCAP3Q53RY4 240 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 C1orf53Q5VUE5 145 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 COX11Q9Y6N1 276 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.15□□□□□ -1.26
HTT-208ENST00000510626 OCIAD2Q56VL3 154 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 OR9G1Q8NH87 305 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 INAFM2P0DMQ5 153 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 CRYBB3P26998 211 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 COL10A1Q03692 680 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 LHX8Q68G74 356 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 PLSCR4Q9NRQ2 329 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 A0A1W2PPV9 198 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 NXPH1P58417 271 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 SRSF6Q13247 344 aaKnown RBP7.15□□□□□ -1.26
HTT-208ENST00000510626 HDHD3Q9BSH5 251 aaPredicted RBP7.15□□□□□ -1.26
HTT-208ENST00000510626 LILRA6Q6PI73 481 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 ZP1P60852 638 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 BCL6BQ8N143 479 aaPredicted RBP7.15□□□□□ -1.26
HTT-208ENST00000510626 RTBDNQ9BSG5 229 aaPredicted RBP7.15□□□□□ -1.26
HTT-208ENST00000510626 RTN4RQ9BZR6 473 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 LHX9Q9NQ69 397 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 NHSL1Q5SYE7 1610 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 LINC00271P0C7V0 271 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 CDKN1BP46527 198 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 LDLRAD2Q5SZI1 272 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 OTORQ9NRC9 128 aa7.15□□□□□ -1.26
HTT-208ENST00000510626 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.26
HTT-208ENST00000510626 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.15□□□□□ -1.27
HTT-208ENST00000510626 ASCL2Q99929 193 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 SPATA31B1PQ5VZV4 182 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 DTX1Q86Y01 620 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.27
HTT-208ENST00000510626 CTHRC1Q96CG8 243 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 LHFPL6Q9Y693 200 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 GRIFINA4D1Z8 144 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 IGLV3-21P80748 117 aaPredicted RBP7.15□□□□□ -1.27
HTT-208ENST00000510626 C10orf91Q5T1B1 145 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 LAMTOR3Q9UHA4 124 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 TMEM238C9JI98 176 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 C3orf80F5H4A9 247 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 ZNF576Q9H609 170 aa7.15□□□□□ -1.27
HTT-208ENST00000510626 KLRB1Q12918 225 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SCGB3A1Q96QR1 104 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 PATE1Q8WXA2 126 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 CALYQ9NYX4 217 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 FOXD3Q9UJU5 478 aaPredicted RBP7.14□□□□□ -1.27
HTT-208ENST00000510626 F11RQ9Y624 299 aaKnown RBP7.14□□□□□ -1.27
HTT-208ENST00000510626 TMEM131Q92545 1883 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 TRPM7Q96QT4 1865 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 PIN1P1O15428 100 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 WNT5AP41221 380 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 FHL5Q5TD97 284 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 TRAV8-2A0A0B4J237 113 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 IL11P20809 199 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SRSF2Q01130 221 aaKnown RBP7.14□□□□□ -1.27
HTT-208ENST00000510626 RRN3P1Q2M238 152 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 LHFPL4Q7Z7J7 247 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 CHAC1Q9BUX1 264 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 CUL9Q8IWT3 2517 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 PDE6HQ13956 83 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 DYNLRB2Q8TF09 96 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SIP14410 1827 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 IGHV3-43A0A0B4J1X8 118 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 AHRRA9YTQ3 701 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 IGHV3-43DP0DP04 118 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 TMEM126AQ9H061 195 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SERF1AO75920 110 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SNRPD3P62318 126 aaKnown RBP7.14□□□□□ -1.27
HTT-208ENST00000510626 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 A0A0G2JK05 382 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SRSF1Q07955 248 aaKnown RBP eCLIP7.14□□□□□ -1.27
HTT-208ENST00000510626 WNT2BQ93097 391 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 FSCN3Q9NQT6 498 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms