RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 WFDC8Q8IUA0 241 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 CCL13Q99616 98 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 OPN3Q9H1Y3 402 aaPredicted RBP12.43□□□□□ -0.42
USP38-202ENST00000510377 BET1LQ9NYM9 111 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 TRAV3A0A0B4J244 114 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
USP38-202ENST00000510377 KLF3P57682 345 aaPredicted RBP12.43□□□□□ -0.42
USP38-202ENST00000510377 BPIFB3P59826 476 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 COLCA1Q6ZS62 124 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 ZNF114Q8NC26 417 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 RNF24Q9Y225 148 aa12.43□□□□□ -0.42
USP38-202ENST00000510377 NKX6-3A6NJ46 265 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 PRR33A8MZF0 331 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 MGST3O14880 152 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 FOXF2Q12947 444 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 OR1B1Q8NGR6 318 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 HARBI1Q96MB7 349 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 MRPL37Q9BZE1 423 aaKnown RBP12.42□□□□□ -0.42
USP38-202ENST00000510377 IL18BPO95998 194 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 TNFAIP6P98066 277 aaPredicted RBP12.42□□□□□ -0.42
USP38-202ENST00000510377 ARSJQ5FYB0 599 aaPredicted RBP12.42□□□□□ -0.42
USP38-202ENST00000510377 CALYQ9NYX4 217 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 ACACBO00763 2458 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 HSPE1P61604 102 aaKnown RBP12.42□□□□□ -0.42
USP38-202ENST00000510377 SRSF7Q16629 238 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP38-202ENST00000510377 U3KQA8 63 aa12.42□□□□□ -0.42
USP38-202ENST00000510377 MYOD1P15172 320 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 ITLN1Q8WWA0 313 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 SEPSECSQ9HD40 501 aaKnown RBP12.41□□□□□ -0.42
USP38-202ENST00000510377 CHD9Q3L8U1 2897 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 CHRNB4P30926 498 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 ZNF355PQ9NSJ1 428 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 PLCE1Q9P212 2302 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 TMEM131Q92545 1883 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 FOXH1O75593 365 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 IGHV1-2P23083 117 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 MED12LQ86YW9 2145 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 POLR3KQ9Y2Y1 108 aaPredicted RBP12.41□□□□□ -0.42
USP38-202ENST00000510377 OTOGLQ3ZCN5 2332 aa12.41□□□□□ -0.42
USP38-202ENST00000510377 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 IGKV3D-15A0A087WSY6 115 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 LINC00869P0C866 280 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 SELLP14151 372 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 ZFP36L1Q07352 338 aaKnown RBP12.4□□□□□ -0.42
USP38-202ENST00000510377 RNF138Q8WVD3 245 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 CT45A6P0DMU7 189 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 CT45A5P0DMU8 189 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 CT45A7P0DMV0 189 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 PCP4P48539 62 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 FOXA3P55318 350 aaPredicted RBP12.4□□□□□ -0.42
USP38-202ENST00000510377 CT45A1Q5HYN5 189 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 ODF3L1Q8IXM7 274 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 CT45A3Q8NHU0 189 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 DKK1O94907 266 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 KIR2DS2P43631 304 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 GPR6P46095 362 aaPredicted RBP12.4□□□□□ -0.42
USP38-202ENST00000510377 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 PRNDQ9UKY0 176 aa12.4□□□□□ -0.42
USP38-202ENST00000510377 MED13Q9UHV7 2174 aa12.4□□□□□ -0.43
USP38-202ENST00000510377 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
USP38-202ENST00000510377 PRB4P10163 310 aaPredicted RBP12.39□□□□□ -0.43
USP38-202ENST00000510377 MAS1LP35410 378 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 CCL8P80075 99 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 C1orf194Q5T5A4 169 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 CCL17Q92583 94 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 MIEN1Q9BRT3 115 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 NRN1Q9NPD7 142 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 IGHV3-72A0A0B4J1Y9 119 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP38-202ENST00000510377 MMDQ15546 238 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 FLYWCH2Q96CP2 140 aaKnown RBP12.39□□□□□ -0.43
USP38-202ENST00000510377 UQCR10Q9UDW1 63 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 ABCA4P78363 2273 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 NKX2-8O15522 239 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 CNIH1O95406 144 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 CECR9P0C854 216 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 EFNB3Q15768 340 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 PPIAL4AQ9Y536 164 aa12.39□□□□□ -0.43
USP38-202ENST00000510377 BHLHA15Q7RTS1 189 aaPredicted RBP12.39□□□□□ -0.43
USP38-202ENST00000510377 EAF1Q96JC9 268 aaPredicted RBP12.39□□□□□ -0.43
USP38-202ENST00000510377 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 TRGV8A0A0C4DH27 118 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 DPRXA6NFQ7 191 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 C21orf140B9A014 251 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 REG1AP05451 166 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 KRTCAP3Q53RY4 240 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 OR4A47Q6IF82 309 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 WDR82Q6UXN9 313 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms