RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 ARHGAP24Q8N264 748 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 GDPD1Q8N9F7 314 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 STXBP6Q8NFX7 210 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 SCARB1Q8WTV0 552 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 UPK3BQ9BT76 320 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 TMEM59Q9BXS4 323 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 GHRLQ9UBU3 117 aa7.44□□□□□ -1.22
SNF8-207ENST00000509995 MRPS7Q9Y2R9 242 aaKnown RBP7.44□□□□□ -1.22
SNF8-207ENST00000509995 RBM7Q9Y580 266 aaKnown RBP7.44□□□□□ -1.22
SNF8-207ENST00000509995 IGHV3-66A0A0C4DH42 116 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 TRDCB7Z8K6 153 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 RAB27BO00194 218 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 BET1O15155 118 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 HOXB6P17509 224 aaKnown RBP7.43□□□□□ -1.22
SNF8-207ENST00000509995 OR10K2Q6IF99 312 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 OR4A4PQ8NGN8 299 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 OR10J5Q8NHC4 309 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 RNF141Q8WVD5 230 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 GGHQ92820 318 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 LGALS12Q96DT0 336 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 RAB40CQ96S21 281 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 GINS3Q9BRX5 216 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 CABLES2Q9BTV7 478 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 ERVK13-1Q9NX77 482 aa7.43□□□□□ -1.22
SNF8-207ENST00000509995 A0A087WTM6 91 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 TRBV5-5A0A0J9YX44 114 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 LOC102723971A0A1B0GUV8 181 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 K7EIM0 57 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 POLR2IP36954 125 aaKnown RBP7.42□□□□□ -1.22
SNF8-207ENST00000509995 CCDC58Q4VC31 144 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 IGSF11Q5DX21 431 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 OGFRL1Q5TC84 451 aaPredicted RBP7.42□□□□□ -1.22
SNF8-207ENST00000509995 SLC25A24Q6NUK1 477 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 RPL22L1Q6P5R6 122 aaKnown RBP7.42□□□□□ -1.22
SNF8-207ENST00000509995 OR4S2Q8NH73 311 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 DCANP1Q8TF63 244 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 CCDC124Q96CT7 223 aaKnown RBP7.42□□□□□ -1.22
SNF8-207ENST00000509995 UQCC2Q9BRT2 126 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 TM2D1Q9BX74 207 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 MAGT1Q9H0U3 335 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 TAGLN3Q9UI15 199 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 HSF4Q9ULV5 492 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 PRELID3BQ9Y3B1 194 aa7.42□□□□□ -1.22
SNF8-207ENST00000509995 TRBV6-7A0A0A0MS04 114 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 A0A0A6YYD4 124 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 F5H768 121 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 FABP7O15540 132 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 FKBP6O75344 327 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 DCTN3O75935 186 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 UBBP0CG47 229 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 Q499Y3 187 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 ZNF773Q6PK81 442 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 NKAIN3Q8N8D7 197 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 OR10W1Q8NGF6 305 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 RNF125Q96EQ8 232 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 CIB1Q99828 191 aa7.41□□□□□ -1.22
SNF8-207ENST00000509995 A0A1W2PPK0 400 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 AQP12BA6NM10 295 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 DIRAS3O95661 229 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 SERPINE2P07093 398 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 RPL30P62888 115 aaKnown RBP7.4□□□□□ -1.22
SNF8-207ENST00000509995 UNC119Q13432 240 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 PSMG4Q5JS54 123 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 AQP12AQ8IXF9 295 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 SMIM19Q96E16 107 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 GABARAPL3Q9BY60 117 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 NXF2Q9GZY0 626 aaKnown RBP7.4□□□□□ -1.22
SNF8-207ENST00000509995 KCNK15Q9H427 330 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 TMEM231Q9H6L2 316 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 BET1LQ9NYM9 111 aa7.4□□□□□ -1.22
SNF8-207ENST00000509995 H3BMM0 161 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 HBE1P02100 147 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 OR13C7P0DN81 318 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 TAS2R43P59537 309 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 RPS11P62280 158 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNF8-207ENST00000509995 WT1-ASQ06250 92 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 SSX1Q16384 188 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 TIMM50Q3ZCQ8 353 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 MEDAGQ5VYS4 303 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 TRUB1Q8WWH5 349 aaKnown RBP7.39□□□□□ -1.23
SNF8-207ENST00000509995 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 CMSS1Q9BQ75 279 aaKnown RBP7.39□□□□□ -1.23
SNF8-207ENST00000509995 QTRT1Q9BXR0 403 aaKnown RBP7.39□□□□□ -1.23
SNF8-207ENST00000509995 FAM30AQ9NZY2 134 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
SNF8-207ENST00000509995 FAT4Q6V0I7 4981 aa7.39□□□□□ -1.23
SNF8-207ENST00000509995 HELTA6NFD8 242 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 G3V2T6 193 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 SOCS1O15524 211 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 HRASP01112 189 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 CD36P16671 472 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 BRWD1-AS2P59051 145 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 KRTAP10-4P60372 401 aaPredicted RBP7.38□□□□□ -1.23
SNF8-207ENST00000509995 TOMM20LQ6UXN7 152 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 SLC29A1Q99808 456 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 GINS4Q9BRT9 223 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 COMMD5Q9GZQ3 224 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 GABARAPL1Q9H0R8 117 aa7.38□□□□□ -1.23
SNF8-207ENST00000509995 HRASLSQ9HDD0 168 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms