RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 TGIF2LXQ8IUE1 241 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 STPG2Q8N412 459 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 EAF1Q96JC9 268 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-208ENST00000509389 P2RX4Q99571 388 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
HMGCL-208ENST00000509389 KMT2CQ8NEZ4 4911 aaKnown RBP11.43□□□□□ -0.58
HMGCL-208ENST00000509389 C13orf42A0A1B0GVH6 325 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 FAM25EA8MYX2 175 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 PSMB6P28072 239 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 AKR1C2P52895 323 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 RAB32Q13637 225 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 SMCO1Q147U7 214 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 LAMTOR1Q6IAA8 161 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 Q6ZRM9 215 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 Q8N6K4 173 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 OSR1Q8TAX0 266 aaPredicted RBP11.43□□□□□ -0.58
HMGCL-208ENST00000509389 SLC35D1Q9NTN3 355 aa11.43□□□□□ -0.58
HMGCL-208ENST00000509389 TNCP24821 2201 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 NCBP2LA6PVI3 153 aaKnown RBP11.42□□□□□ -0.58
HMGCL-208ENST00000509389 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 APOA2P02652 100 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 MBPP02686 304 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-208ENST00000509389 IGKV1-16P04430 117 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 FGF2P09038 288 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 NQO2P16083 231 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 MC5RP33032 325 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 ID3Q02535 119 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 RTL8BQ17RB0 113 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 Q8N9W7 124 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 OR2T10Q8NGZ9 312 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 DUX3Q96PT4 197 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 RNF126Q9BV68 326 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 RCL1Q9Y2P8 373 aaKnown RBP11.42□□□□□ -0.58
HMGCL-208ENST00000509389 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 TENM3Q9P273 2699 aa11.42□□□□□ -0.58
HMGCL-208ENST00000509389 K7EPK0 472 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 AP4M1O00189 453 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 DEDDO75618 318 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 CRYZL1O95825 349 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 PET100P0DJ07 73 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 G6PCP35575 357 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
HMGCL-208ENST00000509389 CD69Q07108 199 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 FAM71E2Q8N5Q1 922 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 RRNAD1Q96FB5 475 aaKnown RBP11.41□□□□□ -0.58
HMGCL-208ENST00000509389 RAX2Q96IS3 184 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 B9D2Q9BPU9 175 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 PLSCR3Q9NRY6 295 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 MBD2Q9UBB5 411 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 RNF222A6NCQ9 220 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 SNAPC5O75971 98 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 KRASP01116 189 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
HMGCL-208ENST00000509389 CD1BP29016 333 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 ZNF345Q14585 488 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
HMGCL-208ENST00000509389 LCNL1Q6ZST4 164 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 PUSL1Q8N0Z8 303 aaKnown RBP11.41□□□□□ -0.58
HMGCL-208ENST00000509389 DMBX1Q8NFW5 382 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 RHOVQ96L33 236 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 BET1LQ9NYM9 111 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 HSPB7Q9UBY9 170 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
HMGCL-208ENST00000509389 CCL24O00175 119 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 ST8SIA3O43173 380 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 MOSP00540 346 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 HRASP01112 189 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 IGLV2-23P01705 113 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 NKX2-1P43699 371 aaPredicted RBP11.4□□□□□ -0.59
HMGCL-208ENST00000509389 IZUMO4Q1ZYL8 232 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 LRRC37A5PQ49AS3 106 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 ZNF429Q86V71 674 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 OR1S1Q8NH92 325 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 RBMXL1Q96E39 390 aaKnown RBP11.4□□□□□ -0.59
HMGCL-208ENST00000509389 GON7Q9BXV9 100 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 TMEM140Q9NV12 185 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 OR5AC2Q9NZP5 309 aa11.4□□□□□ -0.59
HMGCL-208ENST00000509389 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
HMGCL-208ENST00000509389 OR9G9P0C7N8 305 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 CXCL2P19875 107 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 FOXE3Q13461 319 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 LGALSLQ3ZCW2 172 aaPredicted RBP11.39□□□□□ -0.59
HMGCL-208ENST00000509389 CXorf66Q5JRM2 361 aaPredicted RBP11.39□□□□□ -0.59
HMGCL-208ENST00000509389 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 H2BFWTQ7Z2G1 175 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 GRPEL2Q8TAA5 225 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 THAP6Q8TBB0 222 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 AQP10Q96PS8 301 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 RNF5Q99942 180 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 RASL11BQ9BPW5 248 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 AIFM2Q9BRQ8 373 aa11.39□□□□□ -0.59
HMGCL-208ENST00000509389 GSKIPQ9P0R6 139 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms