RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 MINDY2Q8NBR6 621 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 OR5T1Q8NG75 326 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 OR5M8Q8NGP6 311 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 PLEKHA3Q9HB20 300 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 C13orf42A0A1B0GVH6 325 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 DBX1A6NMT0 343 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 FAM25EA8MYX2 175 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 SSNA1O43805 119 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 OXA1LQ15070 435 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 MDFIQ99750 246 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 SRSF8Q9BRL6 282 aaKnown RBP11.65□□□□□ -0.54
RNF4-213ENST00000509388 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
RNF4-213ENST00000509388 ATRQ13535 2644 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 E7EUB6 86 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 FBXO24O75426 580 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 ELANEP08246 267 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 OR13C7P0DN81 318 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 PF4V1P10720 104 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 SLC25A6P12236 298 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 DEFA4P12838 97 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
RNF4-213ENST00000509388 SPCS3P61009 180 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 ERHP84090 104 aaKnown RBP11.64□□□□□ -0.55
RNF4-213ENST00000509388 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 KRTAP21-3Q3LHN1 58 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 CXorf66Q5JRM2 361 aaPredicted RBP11.64□□□□□ -0.55
RNF4-213ENST00000509388 KHDC1LQ5JSQ8 128 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 C11orf44Q8N8P7 122 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 WFDC12Q8WWY7 111 aa11.64□□□□□ -0.55
RNF4-213ENST00000509388 TCRBV4S1A1TA0A5B7 111 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 C5orf51A6NDU8 294 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 CEBPZOSA8MTT3 80 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 TEX22C9J3V5 150 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 CYB5BO43169 146 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 NXPH3O95157 252 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 IGHG4P01861 327 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 PSMB6P28072 239 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 PPIFP30405 207 aaKnown RBP11.63□□□□□ -0.55
RNF4-213ENST00000509388 FOXE3Q13461 319 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 IAH1Q2TAA2 248 aaPredicted RBP11.63□□□□□ -0.55
RNF4-213ENST00000509388 SPINK9Q5DT21 86 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 C10orf99Q6UWK7 81 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 OR10W1Q8NGF6 305 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
RNF4-213ENST00000509388 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 GSKIPQ9P0R6 139 aa11.63□□□□□ -0.55
RNF4-213ENST00000509388 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 CCSO14618 274 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 REG1AP05451 166 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 CD28P10747 220 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 AREGP15514 252 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 SNCAP37840 140 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 CFHR3Q02985 330 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 ASPHD1Q5U4P2 390 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 ZNF747Q9BV97 191 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 HIPK2Q9H2X6 1198 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 SLA2Q9H6Q3 261 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 ALG5Q9Y673 324 aa11.62□□□□□ -0.55
RNF4-213ENST00000509388 A0A1B0GW64 132 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 H3BUA1 57 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 WRBO00258 174 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 GOSR2O14653 212 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 MED6O75586 246 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 IGLV1-40P01703 118 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 TRGV3P03979 118 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 SHISA2Q6UWI4 295 aa11.61□□□□□ -0.55
RNF4-213ENST00000509388 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
RNF4-213ENST00000509388 C7orf66A4D0T2 115 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 MPTX1A8MV57 137 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 SOX15O60248 233 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 PITX3O75364 302 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 CRYGCP07315 174 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 CTRB1P17538 263 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 PSMB8P28062 276 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 NKX2-1P43699 371 aaPredicted RBP11.6□□□□□ -0.55
RNF4-213ENST00000509388 RAB9AP51151 201 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF4-213ENST00000509388 TPPP2P59282 170 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 WT1-ASQ06250 92 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 CTRB2Q6GPI1 263 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 WIPF2Q8TF74 440 aaPredicted RBP11.6□□□□□ -0.55
RNF4-213ENST00000509388 OR10C1Q96KK4 312 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 ZFP57Q9NU63 452 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 THYN1Q9P016 225 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
RNF4-213ENST00000509388 PRH1P02810 166 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms