RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 FAM106AQ4KMX7 169 aa16.65■□□□□ 0.26
PACRGL-220ENST00000508952 CASC10Q5T4H9 136 aa16.65■□□□□ 0.26
PACRGL-220ENST00000508952 ZNF502Q8TBZ5 544 aa16.65■□□□□ 0.26
PACRGL-220ENST00000508952 WDR89Q96FK6 387 aaPredicted RBP16.65■□□□□ 0.26
PACRGL-220ENST00000508952 NEURL2Q9BR09 285 aa16.65■□□□□ 0.26
PACRGL-220ENST00000508952 HINT2Q9BX68 163 aa16.65■□□□□ 0.26
PACRGL-220ENST00000508952 SCPEP1Q9HB40 452 aa16.65■□□□□ 0.26
PACRGL-220ENST00000508952 TMEM213A2RRL7 107 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 SMIM18P0DKX4 95 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 CBLN1P23435 193 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 RCVRNP35243 200 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 RNASE12Q5GAN4 147 aaKnown RBP16.64■□□□□ 0.25
PACRGL-220ENST00000508952 LAX1Q8IWV1 398 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 GDPD1Q8N9F7 314 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 OR1L8Q8NGR8 309 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 CITED4Q96RK1 184 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 SPATA25Q9BR10 227 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 WFDC10AQ9H1F0 79 aa16.64■□□□□ 0.25
PACRGL-220ENST00000508952 TECRQ9NZ01 308 aaKnown RBP16.64■□□□□ 0.25
PACRGL-220ENST00000508952 DYNC2H1Q8NCM8 4307 aaKnown RBP16.64■□□□□ 0.25
PACRGL-220ENST00000508952 IGHV3-35A0A0C4DH35 117 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 A8MWP6 167 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 TPPPO94811 219 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 SERPINE2P07093 398 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 RORCP51449 518 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 THOC7Q6I9Y2 204 aaKnown RBP16.63■□□□□ 0.25
PACRGL-220ENST00000508952 UNQ9165/PRO28630Q6UXU0 137 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 NDUFA4L2Q9NRX3 87 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 SLC2A8Q9NY64 477 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 MLXQ9UH92 298 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 OR51B2Q9Y5P1 312 aa16.63■□□□□ 0.25
PACRGL-220ENST00000508952 FAM25AB3EWG3 89 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 FAM25CB3EWG5 89 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 FAM25GB3EWG6 89 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 M0QYG6 137 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 PTBP1P26599 531 aaKnown RBP eCLIP16.62■□□□□ 0.253e-11■■■■■ 45.8
PACRGL-220ENST00000508952 CTF1Q16619 201 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 TM4SF20Q53R12 229 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 SLC25A24Q6NUK1 477 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 TBC1D26Q86UD7 250 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 DEFB125Q8N687 156 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 UXS1Q8NBZ7 420 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 THYN1Q9P016 225 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 CSMD3Q7Z407 3707 aa16.62■□□□□ 0.25
PACRGL-220ENST00000508952 IGHV3-21A0A0B4J1V1 117 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 SNAPC5O75971 98 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 LYL1P12980 280 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 MFAP2P55001 183 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 TMEM61Q8N0U2 210 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 LSM10Q969L4 123 aaKnown RBP16.61■□□□□ 0.25
PACRGL-220ENST00000508952 EDA2RQ9HAV5 297 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 CEPT1Q9Y6K0 416 aa16.61■□□□□ 0.25
PACRGL-220ENST00000508952 STARD9Q9P2P6 4700 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 DBX1A6NMT0 343 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 CYB5BO43169 146 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 GABARAPO95166 117 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 S100GP29377 79 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 ZNF57Q68EA5 555 aaPredicted RBP16.6■□□□□ 0.25
PACRGL-220ENST00000508952 LPCAT3Q6P1A2 487 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 MZT2AQ6P582 158 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 PLET1Q6UQ28 207 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 HSD17B13Q7Z5P4 300 aaPredicted RBP16.6■□□□□ 0.25
PACRGL-220ENST00000508952 CADM3Q8N126 398 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 VN1R17PQ8TDU5 208 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 RETNQ9HD89 108 aa16.6■□□□□ 0.25
PACRGL-220ENST00000508952 F11RQ9Y624 299 aaKnown RBP16.6■□□□□ 0.25
PACRGL-220ENST00000508952 OR2T8A6NH00 312 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 OR11H12B2RN74 326 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 TGOLN2O43493 480 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 GPR107Q5VW38 600 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 BTNL8Q6UX41 500 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 LINC00322Q6ZN03 302 aaPredicted RBP16.59■□□□□ 0.25
PACRGL-220ENST00000508952 SLC38A6Q8IZM9 456 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 ISOC1Q96CN7 298 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 SRD5A3Q9H8P0 318 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 PALMDQ9NP74 551 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 KLK11Q9UBX7 282 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 PRNDQ9UKY0 176 aa16.59■□□□□ 0.25
PACRGL-220ENST00000508952 RBMY1BA6NDE4 496 aaKnown RBP16.58■□□□□ 0.24
PACRGL-220ENST00000508952 RBMY1EA6NEQ0 496 aaKnown RBP16.58■□□□□ 0.24
PACRGL-220ENST00000508952 C15orf61A6NNL5 157 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 SCAF4O95104 1147 aaKnown RBP16.58■□□□□ 0.24
PACRGL-220ENST00000508952 IGKV1-39P01597 117 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 IGKV1D-39P04432 117 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 RBMY1DP0C7P1 496 aaKnown RBP16.58■□□□□ 0.24
PACRGL-220ENST00000508952 UCP3P55916 312 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 ZFAND6Q6FIF0 208 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 AP3S1Q92572 193 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 TMEM14BQ9NUH8 114 aa16.58■□□□□ 0.24
PACRGL-220ENST00000508952 ZNF182P17025 639 aaPredicted RBP16.57■□□□□ 0.24
PACRGL-220ENST00000508952 OR5B3Q8NH48 314 aa16.57■□□□□ 0.24
PACRGL-220ENST00000508952 OR52I2Q8NH67 350 aa16.57■□□□□ 0.24
PACRGL-220ENST00000508952 SEC22AQ96IW7 307 aa16.57■□□□□ 0.24
PACRGL-220ENST00000508952 TSC22D3Q99576 134 aa16.57■□□□□ 0.24
PACRGL-220ENST00000508952 ZNF436Q9C0F3 470 aaPredicted RBP16.57■□□□□ 0.24
PACRGL-220ENST00000508952 FAM212BQ9NTI7 297 aaPredicted RBP16.57■□□□□ 0.24
PACRGL-220ENST00000508952 EXTL2Q9UBQ6 330 aa16.57■□□□□ 0.24
PACRGL-220ENST00000508952 TENM2Q9NT68 2774 aa16.56■□□□□ 0.24
PACRGL-220ENST00000508952 IFNA6P05013 189 aa16.56■□□□□ 0.24
PACRGL-220ENST00000508952 C8orf88P0DMB2 117 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms