RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CBY3A6NI87 242 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 NCBP2LA6PVI3 153 aaKnown RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 RHODO00212 210 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 CRYZL1O95825 349 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGKV1-16P04430 117 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TCRBP04435 133 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 RLN1P04808 185 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 SERPINE2P07093 398 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 UCP1P25874 307 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 BTCP35070 178 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 MAS1LP35410 378 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 UBE2KP61086 200 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 ERVK-16P61578 105 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 RPL30P62888 115 aaKnown RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 DCTN2Q13561 401 aaKnown RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 MMDQ15546 238 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 LY6EQ16553 131 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 C5orf64Q2M2E5 130 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 PHLDA2Q53GA4 152 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 C11orf87Q6NUJ2 197 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 CCBE1Q6UXH8 406 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 GLDNQ6ZMI3 551 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC25A42Q86VD7 318 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM219AQ8IW50 185 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 Q8N2B8 174 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 CENPSQ8N2Z9 138 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM71E2Q8N5Q1 922 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 C5orf56Q8N8D9 126 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 Q8N9W7 124 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 DRAXINQ8NBI3 349 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR4F5Q8NH21 305 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR51H1Q8NH63 302 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 ENKURQ8TC29 256 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM158Q8WZ71 300 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 MRGPRFQ96AM1 343 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 HARBI1Q96MB7 349 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM68Q96MH6 324 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 GON7Q9BXV9 100 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM222Q9H0R3 208 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 C16orf95Q9H693 158 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 NAA60Q9H7X0 242 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 PLSCR3Q9NRY6 295 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 BET1LQ9NYM9 111 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF580Q9UK33 172 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TBC1D24Q9ULP9 559 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 VSIG4Q9Y279 399 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 MMP24Q9Y5R2 645 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 NUBP2Q9Y5Y2 271 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 LINC00854A0A1B0GVQ3 168 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 TNFSF12O43508 249 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PRAF2O60831 178 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR2A4O95047 310 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 CDS2O95674 445 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PTTG1O95997 202 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGHG2P01859 326 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 HLA-DRB1P01911 266 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 AKR1C4P17516 323 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 CD24P25063 80 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PAX6P26367 422 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 LPAR6P43657 344 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 CCR6P51684 374 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 F2RL1P55085 397 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 RAB25P57735 213 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 IFITM3Q01628 133 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 HNF4GQ14541 408 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PLGLAQ15195 96 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PSG5Q15238 335 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF585BQ52M93 769 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 THOC7Q6I9Y2 204 aaKnown RBP4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PLET1Q6UQ28 207 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF562Q6V9R5 426 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PPP1R27Q86WC6 154 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM219Q86XT9 240 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 FOXRED2Q8IWF2 684 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 MMD2Q8IY49 270 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 PUSL1Q8N0Z8 303 aaKnown RBP4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 LGI3Q8N145 548 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR2T6Q8NHC8 308 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM167AQ8TBQ9 72 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 RBPMSQ93062 196 aaKnown RBP4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM56Q96MV1 263 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR2A7Q96R45 310 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 C20orf85Q9H1P6 137 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 BEX1Q9HBH7 125 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 FKBP11Q9NYL4 201 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 HSPB7Q9UBY9 170 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 SIGLEC9Q9Y336 463 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM56-RWDD3S4R434 201 aa4.33□□□□□ -1.72
HMGB1P44-201ENST00000508597 A0A0B4J2A0 478 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM89A2RUT3 159 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 CLPSL1A2RUU4 121 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SRRM4A7MD48 611 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 ARPC1BO15143 372 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SLC25A17O43808 307 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 CHST1O43916 411 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 RAMP3O60896 148 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms