RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DEFA3P59666 94 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 OR2B8PP59922 312 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 RUNX1Q01196 453 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 MRGPRG-AS1Q2M3A8 158 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 SP6Q3SY56 376 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 C10orf55Q5SWW7 151 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 ZNF491Q8N8L2 437 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 NECAP1Q8NC96 275 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 ADAD2Q8NCV1 583 aaKnown RBP7.13□□□□□ -1.27
NUP54-207ENST00000508583 OR5T1Q8NG75 326 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 GLYATL2Q8WU03 294 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 DPF1Q92782 380 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 GPR61Q9BZJ8 451 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 ENY2Q9NPA8 101 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 A0A0B4J2A0 478 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 ADARB2-AS1A8MUL3 147 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 TEX22C9J3V5 150 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 CCL24O00175 119 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 SOX15O60248 233 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 UPK1BO75841 260 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 IFNA17P01571 189 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 IGKV1-39P01597 117 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 IGKV1D-39P04432 117 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 CRYGCP07315 174 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 LGALS1P09382 135 aaKnown RBP7.12□□□□□ -1.27
NUP54-207ENST00000508583 CD33P20138 364 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 PSMB6P28072 239 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 CCR6P51684 374 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 HSPE1P61604 102 aaKnown RBP7.12□□□□□ -1.27
NUP54-207ENST00000508583 ERHP84090 104 aaKnown RBP7.12□□□□□ -1.27
NUP54-207ENST00000508583 TMEM268Q5VZI3 342 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 C8orf86Q6ZUL3 223 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 SLC35G3Q8N808 338 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 COQ8AQ8NI60 647 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 TMEM230Q96A57 120 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 MS4A10Q96PG2 267 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 MCRIP2Q9BUT9 160 aaKnown RBP7.12□□□□□ -1.27
NUP54-207ENST00000508583 HINT2Q9BX68 163 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 KLK15Q9H2R5 256 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 PLEKHA3Q9HB20 300 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.12□□□□□ -1.27
NUP54-207ENST00000508583 SHPKQ9UHJ6 478 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 FBN3Q75N90 2809 aa7.12□□□□□ -1.27
NUP54-207ENST00000508583 TRAV3A0A0B4J244 114 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 TEX50A0A1B0GTY4 177 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 FAM240BA0A1B0GVZ2 78 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 HMX3A6NHT5 357 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 SFT2D2O95562 160 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 HLA-AP01891 365 aaKnown RBP7.11□□□□□ -1.27
NUP54-207ENST00000508583 APELAP0DMC3 54 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 OR13C7P0DN81 318 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 CTRB1P17538 263 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 ZP3P21754 424 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 SUB1P53999 127 aaKnown RBP eCLIP7.11□□□□□ -1.27
NUP54-207ENST00000508583 RHOGP84095 191 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 ATP5G2Q06055 141 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 ZNF616Q08AN1 781 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 ASAH1Q13510 395 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 TMEM187Q14656 261 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 C4orf46Q504U0 113 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 ASPHD1Q5U4P2 390 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 CTRB2Q6GPI1 263 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 LCNL1Q6ZST4 164 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 SELENOHQ8IZQ5 122 aaKnown RBP7.11□□□□□ -1.27
NUP54-207ENST00000508583 OR52E5Q8NH55 327 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 ENKURQ8TC29 256 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 RCC1LQ96I51 464 aaKnown RBP7.11□□□□□ -1.27
NUP54-207ENST00000508583 CXorf58Q96LI9 332 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 C20orf85Q9H1P6 137 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 RANGRFQ9HD47 186 aaPredicted RBP7.11□□□□□ -1.27
NUP54-207ENST00000508583 NSG2Q9Y328 171 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 TMED3Q9Y3Q3 217 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 VWFP04275 2813 aa7.11□□□□□ -1.27
NUP54-207ENST00000508583 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 TRBV9A0A0B4J1U6 114 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 I3L521 148 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 CORTO00230 105 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 PLA2G10O15496 165 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 IGKV1-5P01602 117 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 HSPB1P04792 205 aaKnown RBP7.1□□□□□ -1.27
NUP54-207ENST00000508583 P0C879 139 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 SULT1A3P0DMM9 295 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 SULT1A4P0DMN0 295 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 SLC25A6P12236 298 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 AREGP15514 252 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 BTCP35070 178 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 SNCAP37840 140 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 HOXA1P49639 335 aaPredicted RBP7.1□□□□□ -1.27
NUP54-207ENST00000508583 SPCS3P61009 180 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 SUPT4H1P63272 117 aaKnown RBP7.1□□□□□ -1.27
NUP54-207ENST00000508583 PPP1R1AQ13522 171 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 SMCO1Q147U7 214 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 NOXA1Q86UR1 476 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 LRTM2Q8N967 370 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 OR11H1Q8NG94 326 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms