RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 EEF1AKMT3Q96AZ1 226 aa15.24■□□□□ 0.03
SFXN1-209ENST00000508290 TMEM56Q96MV1 263 aa15.24■□□□□ 0.03
SFXN1-209ENST00000508290 FANCD2OSQ96PS1 177 aa15.24■□□□□ 0.03
SFXN1-209ENST00000508290 IGLV11-55A0A075B6I3 123 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 TRBV7-1A0A0A6YYK4 115 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 TRAV3A0A0B4J244 114 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 CGB1A6NKQ9 187 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 RBMXL2O75526 392 aaKnown RBP15.23■□□□□ 0.03
SFXN1-209ENST00000508290 AKAIN1P0CW23 69 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 G6PCP35575 357 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 PIGPP57054 158 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 H2BFWTQ7Z2G1 175 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 GDPD1Q8N9F7 314 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 B9D2Q9BPU9 175 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 NDUFA4L2Q9NRX3 87 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 COPZ2Q9P299 210 aa15.23■□□□□ 0.03
SFXN1-209ENST00000508290 TEX50A0A1B0GTY4 177 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 CCDC160A6NGH7 325 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 C15orf61A6NNL5 157 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 GGCTO75223 188 aaKnown RBP15.22■□□□□ 0.03
SFXN1-209ENST00000508290 IGLV1-51P01701 117 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 SYNJ2BPP57105 145 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 DEFA5Q01523 94 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 SCGB2B2Q4G0G5 96 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 ATP6V0BQ99437 205 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 PRRT1Q99946 306 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 TMEM14BQ9NUH8 114 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 LSM4Q9Y4Z0 139 aaKnown RBP15.22■□□□□ 0.03
SFXN1-209ENST00000508290 OR51B2Q9Y5P1 312 aa15.22■□□□□ 0.03
SFXN1-209ENST00000508290 FABP12A6NFH5 140 aa15.21■□□□□ 0.03
SFXN1-209ENST00000508290 LY86O95711 162 aa15.21■□□□□ 0.03
SFXN1-209ENST00000508290 TRBV12-3P01733 135 aa15.21■□□□□ 0.03
SFXN1-209ENST00000508290 CTSDP07339 412 aaPredicted RBP15.21■□□□□ 0.03
SFXN1-209ENST00000508290 CD69Q07108 199 aa15.21■□□□□ 0.03
SFXN1-209ENST00000508290 SEC22AQ96IW7 307 aa15.21■□□□□ 0.03
SFXN1-209ENST00000508290 PRR25Q96S07 402 aa15.21■□□□□ 0.03
SFXN1-209ENST00000508290 C14orf166Q9Y224 244 aaKnown RBP15.21■□□□□ 0.03
SFXN1-209ENST00000508290 BMPR1BO00238 502 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 OR13C7P0DN81 318 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 MYOD1P15172 320 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 TNFSF8P32971 234 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 S100A5P33763 92 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 PPP5CP53041 499 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 OR4D10Q8NGI6 311 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 OR4A16Q8NH70 328 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 SLC2A8Q9NY64 477 aa15.2■□□□□ 0.02
SFXN1-209ENST00000508290 C3orf85A0A1B0GTC6 90 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 ANKRD20A5PA0PJZ0 165 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 NDUFB8O95169 186 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 OR13C8Q8NGS7 320 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 OR2K2Q8NGT1 345 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 VN1R17PQ8TDU5 208 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 DEDD2Q8WXF8 326 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 MRGPRFQ96AM1 343 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 SCGB3A2Q96PL1 93 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 SCP2D1Q9UJQ7 156 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 SMAD5-AS1Q9Y6J3 95 aa15.19■□□□□ 0.02
SFXN1-209ENST00000508290 LGALS9O00182 355 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 REG1AP05451 166 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 NHLRC4P0CG21 123 aaPredicted RBP15.18■□□□□ 0.02
SFXN1-209ENST00000508290 GP9P14770 177 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 SPNP16150 400 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 WT1-ASQ06250 92 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 GPHB5Q86YW7 130 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 MARCH1Q8TCQ1 289 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 HINT2Q9BX68 163 aa15.18■□□□□ 0.02
SFXN1-209ENST00000508290 RBM38Q9H0Z9 239 aaKnown RBP15.18■□□□□ 0.02
SFXN1-209ENST00000508290 F11RQ9Y624 299 aaKnown RBP15.18■□□□□ 0.02
SFXN1-209ENST00000508290 IGKV1-39P01597 117 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 IGKV1D-39P04432 117 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 PI3P19957 117 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 UCP1P25874 307 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 FAUP35544 74 aaKnown RBP15.17■□□□□ 0.02
SFXN1-209ENST00000508290 ARL3P36405 182 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 AKR1C2P52895 323 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 AP3S2P59780 193 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 FAM106AQ4KMX7 169 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 LCN12Q6JVE5 192 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 IL34Q6ZMJ4 242 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 Q8N402 240 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 OR10W1Q8NGF6 305 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 OR4C16Q8NGL9 310 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 CCDC140Q96MF4 163 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 NSG2Q9Y328 171 aa15.17■□□□□ 0.02
SFXN1-209ENST00000508290 MECP2P51608 486 aaKnown RBP15.16■□□□□ 0.02
SFXN1-209ENST00000508290 HSPE1P61604 102 aaKnown RBP15.16■□□□□ 0.02
SFXN1-209ENST00000508290 PRCDQ00LT1 54 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 TRIM16LQ309B1 348 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 CLEC19AQ6UXS0 136 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 C19orf35Q6ZS72 473 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 FAM219AQ8IW50 185 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 OR1P1Q8NH06 330 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 RRNAD1Q96FB5 475 aaKnown RBP15.16■□□□□ 0.02
SFXN1-209ENST00000508290 TP53RKQ96S44 253 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 GAR1Q9NY12 217 aaKnown RBP15.16■□□□□ 0.02
SFXN1-209ENST00000508290 DMRT1Q9Y5R6 373 aa15.16■□□□□ 0.02
SFXN1-209ENST00000508290 PIGBOS1A0A0B4J2F0 54 aa15.15■□□□□ 0.02
SFXN1-209ENST00000508290 CSN3P07498 182 aa15.15■□□□□ 0.02
SFXN1-209ENST00000508290 DHODHQ02127 395 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms