RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GGNBP1Q5YKI7 109 aa15.78■□□□□ 0.12
USP53-203ENST00000507597 OR1L6Q8NGR2 347 aa15.78■□□□□ 0.12
USP53-203ENST00000507597 SLA2Q9H6Q3 261 aa15.78■□□□□ 0.12
USP53-203ENST00000507597 NDUFA4L2Q9NRX3 87 aa15.78■□□□□ 0.12
USP53-203ENST00000507597 FAM90A26D6RGX4 464 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 FBXO24O75426 580 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 MED6O75586 246 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 LY86O95711 162 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 IGHG4P01861 327 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 DEFA4P12838 97 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 PPIFP30405 207 aaKnown RBP15.77■□□□□ 0.12
USP53-203ENST00000507597 SSBP2P81877 361 aaPredicted RBP15.77■□□□□ 0.12
USP53-203ENST00000507597 PRCDQ00LT1 54 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 TTC9CQ8N5M4 171 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 FAM110DQ8TAY7 271 aaPredicted RBP15.77■□□□□ 0.12
USP53-203ENST00000507597 ZNF747Q9BV97 191 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 ZNF355PQ9NSJ1 428 aa15.77■□□□□ 0.12
USP53-203ENST00000507597 A0A0G2JRQ6 117 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 NPIPB5A8MRT5 1133 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 G3V318 75 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 ST8SIA3O43173 380 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 SSNA1O43805 119 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 HIST1H1BP16401 226 aaKnown RBP15.76■□□□□ 0.11
USP53-203ENST00000507597 SUB1P53999 127 aaKnown RBP eCLIP15.76■□□□□ 0.11
USP53-203ENST00000507597 OXA1LQ15070 435 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 TATDN3Q17R31 274 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 C10orf55Q5SWW7 151 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 SHISA2Q6UWI4 295 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 ZNF329Q86UD4 541 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 WFDC12Q8WWY7 111 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 HIPK2Q9H2X6 1198 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 ZFP57Q9NU63 452 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 THYN1Q9P016 225 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 FBXO7Q9Y3I1 522 aa15.76■□□□□ 0.11
USP53-203ENST00000507597 C5orf51A6NDU8 294 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 TEX22C9J3V5 150 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 BRI3O95415 125 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 PF4V1P10720 104 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 SPNP16150 400 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 PSMB6P28072 239 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 HOXA1P49639 335 aaPredicted RBP15.75■□□□□ 0.11
USP53-203ENST00000507597 IZUMO4Q1ZYL8 232 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 AARDQ4LEZ3 155 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 GSG1LQ6UXU4 331 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 OR5T1Q8NG75 326 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 ATRQ13535 2644 aa15.75■□□□□ 0.11
USP53-203ENST00000507597 A0A0G2JLM5 398 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 HMX3A6NHT5 357 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 DBX1A6NMT0 343 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 CEBPZOSA8MTT3 80 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 INS-IGF2F8WCM5 200 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 ADAP1O75689 374 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 OR13C7P0DN81 318 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 SNCAP37840 140 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 CFHR3Q02985 330 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 PDLIM3Q53GG5 364 aaPredicted RBP15.74■□□□□ 0.11
USP53-203ENST00000507597 Q6ZRM9 215 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 NOXA1Q86UR1 476 aa15.74■□□□□ 0.11
USP53-203ENST00000507597 C13orf42A0A1B0GVH6 325 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 TCRBV4S1A1TA0A5B7 111 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 C7orf66A4D0T2 115 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 FAM25EA8MYX2 175 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 WRBO00258 174 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 IGLV1-40P01703 118 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 CRYGCP07315 174 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 IAH1Q2TAA2 248 aaPredicted RBP15.73■□□□□ 0.11
USP53-203ENST00000507597 C19orf54Q5BKX5 351 aa15.73■□□□□ 0.11
USP53-203ENST00000507597 TSSC4Q9Y5U2 329 aaPredicted RBP15.73■□□□□ 0.11
USP53-203ENST00000507597 E7EUB6 86 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 APELAP0DMC3 54 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 MYOD1P15172 320 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 CTRB1P17538 263 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 PSMB8P28062 276 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 RAB9AP51151 201 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 RPP30P78346 268 aaKnown RBP15.72■□□□□ 0.11
USP53-203ENST00000507597 CYCSP99999 105 aaKnown RBP15.72■□□□□ 0.11
USP53-203ENST00000507597 TNFRSF9Q07011 255 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 CTRB2Q6GPI1 263 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 RNF152Q8N8N0 203 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 WIPF2Q8TF74 440 aaPredicted RBP15.72■□□□□ 0.11
USP53-203ENST00000507597 USMG5Q96IX5 58 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 CIB3Q96Q77 187 aaPredicted RBP15.72■□□□□ 0.11
USP53-203ENST00000507597 HEYLQ9NQ87 328 aaPredicted RBP15.72■□□□□ 0.11
USP53-203ENST00000507597 HSPB7Q9UBY9 170 aa15.72■□□□□ 0.11
USP53-203ENST00000507597 IGLC7A0M8Q6 106 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 PITX3O75364 302 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 NKX2-1P43699 371 aaPredicted RBP15.71■□□□□ 0.11
USP53-203ENST00000507597 ATP5IP56385 69 aaPredicted RBP15.71■□□□□ 0.11
USP53-203ENST00000507597 CD83Q01151 205 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 KHDC1LQ5JSQ8 128 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 FAM209BQ5JX69 171 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 ASPHD1Q5U4P2 390 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 NDUFA11Q86Y39 141 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 C2orf50Q96LR7 162 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 MDFIQ99750 246 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 CITED1Q99966 193 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 GSKIPQ9P0R6 139 aa15.71■□□□□ 0.11
USP53-203ENST00000507597 CGB1A6NKQ9 187 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 FAM223BA6NKX1 122 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 TRGV3P03979 118 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms