RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PRNDQ9UKY0 176 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 TMEM213A2RRL7 107 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 CGB1A6NKQ9 187 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 S1PR2O95136 353 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 UXS1Q8NBZ7 420 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 ZNF502Q8TBZ5 544 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 PLEKHA3Q9HB20 300 aa10.88□□□□□ -0.67
HMGCS1-203ENST00000507004 MEIS3P1A6NDR6 274 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 HLA-AP01891 365 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 RLN1P04808 185 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 SERPINE2P07093 398 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 C8orf88P0DMB2 117 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 RFX2P48378 723 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 TSPAN5P62079 268 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 RBPMS2Q6ZRY4 209 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 HIPK2Q9H2X6 1198 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 SRD5A3Q9H8P0 318 aa10.87□□□□□ -0.67
HMGCS1-203ENST00000507004 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 TGOLN2O43493 480 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 IGHV3-23P01764 117 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 PMP2P02689 132 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 REG1AP05451 166 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 FCER2P06734 321 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 CD7P09564 240 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 GPR183P32249 361 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 RCVRNP35243 200 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 LPAR6P43657 344 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 UCP3P55916 312 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 LAMTOR1Q6IAA8 161 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 SLC25A24Q6NUK1 477 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 SLC38A6Q8IZM9 456 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 TMEM61Q8N0U2 210 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 OR52B4Q8NGK2 314 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 GPX8Q8TED1 209 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 AP3S1Q92572 193 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 ZNF436Q9C0F3 470 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 NDUFA4L2Q9NRX3 87 aa10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 F11RQ9Y624 299 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-203ENST00000507004 TRAV3A0A0B4J244 114 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 LCE6AA0A183 80 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 TEX50A0A1B0GTY4 177 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 KRASP01116 189 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 HRH1P35367 487 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 LSM3P62310 102 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 MZT2AQ6P582 158 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 C19orf35Q6ZS72 473 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 DEFB125Q8N687 156 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 FCAMRQ8WWV6 532 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 TMEM190Q8WZ59 177 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 WDR89Q96FK6 387 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 DAZ1Q9NQZ3 744 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 C21orf62Q9NYP8 219 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
HMGCS1-203ENST00000507004 NDUFA4O00483 81 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 ATG12O94817 140 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 RPA2P15927 270 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 RORCP51449 518 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 FXYD6Q9H0Q3 95 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 COMMD3Q9UBI1 195 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 MLXQ9UH92 298 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 S4R3C0 116 aa10.84□□□□□ -0.67
HMGCS1-203ENST00000507004 RYR3Q15413 4870 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 LOC102724200A0A096LPH7 203 aaPredicted RBP10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 C15orf61A6NNL5 157 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 K7EMT4 169 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 HLA-DMAP28067 261 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 TGFBR1P36897 503 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 ZNF585BQ52M93 769 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 BTNL8Q6UX41 500 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 LYSMD2Q8IV50 215 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 OR2C3Q8N628 320 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 OR10W1Q8NGF6 305 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 OR1P1Q8NH06 330 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 CACNG8Q8WXS5 425 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 ZNF486Q96H40 463 aaPredicted RBP10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 TXN2Q99757 166 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 FUNDC2Q9BWH2 189 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 GGTLC1Q9BX51 225 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 TMEM14BQ9NUH8 114 aa10.83□□□□□ -0.68
HMGCS1-203ENST00000507004 RBMY1BA6NDE4 496 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 RBMY1EA6NEQ0 496 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 TSPAN4O14817 238 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 EIF4EP06730 217 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 RBMY1DP0C7P1 496 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 TBPP20226 339 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 FCGR2BP31994 310 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 G6PCP35575 357 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 RELQ04864 619 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 TM4SF20Q53R12 229 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 ZFAND6Q6FIF0 208 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 UNQ9165/PRO28630Q6UXU0 137 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms