RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 C16orf82Q7Z2V1 217 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 TMEM86BQ8N661 226 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 TEX45Q8NA69 505 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 OR4A5Q8NH83 315 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 OR5R1Q8NH85 324 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 VSTM2AQ8TAG5 236 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 STOML3Q8TAV4 291 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 TMEM167AQ8TBQ9 72 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 GPR146Q96CH1 333 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 RHOVQ96L33 236 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 TSNAXQ99598 290 aaKnown RBP5.75□□□□□ -1.49
NUP54-204ENST00000506098 MED28Q9H204 178 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 TMPRSS5Q9H3S3 457 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 METTL1Q9UBP6 276 aaKnown RBP5.75□□□□□ -1.49
NUP54-204ENST00000506098 PITPNC1Q9UKF7 332 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 TCF19Q9Y242 345 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 MMP24Q9Y5R2 645 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 POMT1Q9Y6A1 747 aa5.75□□□□□ -1.49
NUP54-204ENST00000506098 A0A0G2JRQ6 117 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 A0A1B0GU03 582 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 C5orf51A6NDU8 294 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 CBY3A6NI87 242 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 NUDT19A8MXV4 375 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 INAFM1C9JVW0 142 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 H3BUX3 64 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 RRHO14718 337 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 NBR2O15453 112 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 FGF16O43320 207 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 SSNA1O43805 119 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 PITX3O75364 302 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 ADAP1O75689 374 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 KBTBD11O94819 623 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR2F2O95006 317 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR2A4O95047 310 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 KRASP01116 189 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 IFNA21P01568 189 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 HOXB5P09067 269 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR9G9P0C7N8 305 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 SAA1P0DJI8 122 aaPredicted RBP5.74□□□□□ -1.49
NUP54-204ENST00000506098 SRD5A1P18405 259 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 CNTFRP26992 372 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 G0S2P27469 103 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 PSMB6P28072 239 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 F2RL1P55085 397 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 ERVK-16P61578 105 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 RELBQ01201 579 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 IL15RAQ13261 267 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 HES1Q14469 280 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 HAGHQ16775 308 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 VMA21Q3ZAQ7 101 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 Q6ZRM9 215 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 H2BFWTQ7Z2G1 175 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 FOXRED2Q8IWF2 684 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 FAM71E2Q8N5Q1 922 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 Q8N9W7 124 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR11H7Q8NGC8 314 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR5M8Q8NGP6 311 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 SSMEM1Q8WWF3 244 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 RBMXL1Q96E39 390 aaKnown RBP5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR10C1Q96KK4 312 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 OR2A7Q96R45 310 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 TMEM140Q9NV12 185 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 C1RLQ9NZP8 487 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 SIGLEC9Q9Y336 463 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 GOLT1BQ9Y3E0 138 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 MAST4O15021 2626 aa5.74□□□□□ -1.49
NUP54-204ENST00000506098 SERTM2A0A1B0GWG4 89 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 UPK2O00526 184 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 SLC25A17O43808 307 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 CRLF1O75462 422 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 IGHV4-59P01825 116 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 FAM157CP0CG43 387 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 CXCL3P19876 107 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 MAS1LP35410 378 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 AKR1C2P52895 323 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 H2BFSP57053 126 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 RAB5BP61020 215 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 CYCSP99999 105 aaKnown RBP5.73□□□□□ -1.49
NUP54-204ENST00000506098 FCN2Q15485 313 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 MMDQ15546 238 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 USF2Q15853 346 aaPredicted RBP5.73□□□□□ -1.49
NUP54-204ENST00000506098 C5orf64Q2M2E5 130 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 PDLIM3Q53GG5 364 aaPredicted RBP5.73□□□□□ -1.49
NUP54-204ENST00000506098 GSG1LQ6UXU4 331 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 ZNF429Q86V71 674 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 PPP1R27Q86WC6 154 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 VKORC1L1Q8N0U8 176 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 C9orf62Q8N4C0 152 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 SIGLECL1Q8N7X8 197 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 UXS1Q8NBZ7 420 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 OR4D5Q8NGN0 318 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 ASB13Q8WXK3 278 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 BSCL2Q96G97 398 aaPredicted RBP5.73□□□□□ -1.49
NUP54-204ENST00000506098 C2orf50Q96LR7 162 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 SPIN2AQ99865 258 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 SPIN2BQ9BPZ2 258 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 SLC25A33Q9BSK2 321 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 NMES1Q9C002 83 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 ZNF436Q9C0F3 470 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms