RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 AADACL3Q5VUY0 350 aa15.68■□□□□ 0.1
SQSTM1-210ENST00000506042 SLC25A24Q6NUK1 477 aa15.68■□□□□ 0.1
SQSTM1-210ENST00000506042 OR1L8Q8NGR8 309 aa15.68■□□□□ 0.1
SQSTM1-210ENST00000506042 FKBP11Q9NYL4 201 aa15.68■□□□□ 0.1
SQSTM1-210ENST00000506042 PSMB9P28065 219 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 FXYD4P59646 89 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 RELQ04864 619 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 SFXN4Q6P4A7 337 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 UNQ9165/PRO28630Q6UXU0 137 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 C19orf35Q6ZS72 473 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 LGALS14Q8TCE9 139 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 TMEM56Q96MV1 263 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 C20orf24Q9BUV8 137 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 TMEM140Q9NV12 185 aa15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 TXNL4BQ9NX01 149 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-210ENST00000506042 IGLC7A0M8Q6 106 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 K7EMT4 169 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 TMEM127O75204 238 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 CD5P06127 495 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 SERPINE2P07093 398 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 OR13C7P0DN81 318 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 HOGA1Q86XE5 327 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 CMTM1Q8IZ96 169 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 LSM10Q969L4 123 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 RNF183Q96D59 192 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 IFT46Q9NQC8 304 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 C21orf62Q9NYP8 219 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 SELENOKQ9Y6D0 94 aa15.66■□□□□ 0.1
SQSTM1-210ENST00000506042 SACSQ9NZJ4 4579 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 TRAV18A0A075B6X5 111 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 IGHV3-35A0A0C4DH35 117 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 SMIM30A4D0T7 59 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 OR2T8A6NH00 312 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 IFNA4P05014 189 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 PAFAH1B2P68402 229 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 Q56UQ5 140 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 IZUMO2Q6UXV1 221 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 OR51H1Q8NH63 302 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 GATAD1Q8WUU5 269 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 TSC22D3Q99576 134 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 HINT2Q9BX68 163 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 UBQLN2Q9UHD9 624 aa15.65■□□□□ 0.1
SQSTM1-210ENST00000506042 A0A1B0GW64 132 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 C15orf62A8K5M9 175 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 NUPL2O15504 423 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 SSX5O60225 188 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 EIF4EP06730 217 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 TMEM17Q86X19 198 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 UBAC2Q8NBM4 344 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 OR5AP2Q8NGF4 316 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 GIMAP1Q8WWP7 306 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 Q9H521 79 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 RAB26Q9ULW5 256 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 STARD9Q9P2P6 4700 aa15.64■□□□□ 0.09
SQSTM1-210ENST00000506042 MARCH11A6NNE9 402 aa15.63■□□□□ 0.09
SQSTM1-210ENST00000506042 BRWD1-AS2P59051 145 aa15.63■□□□□ 0.09
SQSTM1-210ENST00000506042 UBE2UQ5VVX9 321 aa15.63■□□□□ 0.09
SQSTM1-210ENST00000506042 CENPSQ8N2Z9 138 aa15.63■□□□□ 0.09
SQSTM1-210ENST00000506042 PRNDQ9UKY0 176 aa15.63■□□□□ 0.09
SQSTM1-210ENST00000506042 F11RQ9Y624 299 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-210ENST00000506042 MPTX1A8MV57 137 aa15.62■□□□□ 0.09
SQSTM1-210ENST00000506042 NR2C2APQ86WQ0 139 aa15.62■□□□□ 0.09
SQSTM1-210ENST00000506042 NRG4Q8WWG1 115 aa15.62■□□□□ 0.09
SQSTM1-210ENST00000506042 DNAH1Q9P2D7 4330 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 RPA2P15927 270 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 RPL35AP18077 110 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 F2RP25116 425 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 TCTAP57738 103 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 IDNKQ5T6J7 187 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 LGALS9CQ6DKI2 356 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 CROCCP3Q8IVE0 287 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 CADM3Q8N126 398 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 OR5B3Q8NH48 314 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 PHLDA1Q8WV24 401 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 GPHA2Q96T91 129 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 GINS3Q9BRX5 216 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 MAP6D1Q9H9H5 199 aa15.61■□□□□ 0.09
SQSTM1-210ENST00000506042 CGB1A6NKQ9 187 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 S1PR2O95136 353 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 TAS2R46P59540 309 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 ZNF818PQ6ZRF7 136 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 OR10W1Q8NGF6 305 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 CSTL1Q9H114 145 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 EHFQ9NZC4 300 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 OR51B2Q9Y5P1 312 aa15.6■□□□□ 0.09
SQSTM1-210ENST00000506042 TEX50A0A1B0GTY4 177 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 YIF1AO95070 293 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 CTSDP07339 412 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 SDC2P34741 201 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 ADMP35318 185 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 MXD1Q05195 221 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 RBMS2Q15434 407 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 ODF3L2Q3SX64 289 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 GVQW1Q8N7I0 195 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 S100A16Q96FQ6 103 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 TXN2Q99757 166 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 RARRES2Q99969 163 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 BIRC6Q9NR09 4857 aa15.59■□□□□ 0.09
SQSTM1-210ENST00000506042 SCGB2A1O75556 95 aa15.58■□□□□ 0.08
SQSTM1-210ENST00000506042 LPCAT3Q6P1A2 487 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms