RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 HERC2O95714 4834 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 TRBV7-1A0A0A6YYK4 115 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 IGHV3-21A0A0B4J1V1 117 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 TRAV25A0A0B4J276 109 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 OR2T8A6NH00 312 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
GYPB-205ENST00000505583 SULT1C2O00338 296 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 UPK2O00526 184 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 PDCD5O14737 125 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 ZNF207O43670 478 aaKnown RBP4.31□□□□□ -1.72
GYPB-205ENST00000505583 CTXN2P0C2S0 81 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 DEFA4P12838 97 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 HIST1H1BP16401 226 aaKnown RBP4.31□□□□□ -1.72
GYPB-205ENST00000505583 FCGR2CP31995 323 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 BMI1P35226 326 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 MAS1LP35410 378 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 WT1-ASQ06250 92 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 TBCEQ15813 527 aaPredicted RBP4.31□□□□□ -1.72
GYPB-205ENST00000505583 ANKRD55Q3KP44 614 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 PLET1Q6UQ28 207 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 RBPMS2Q6ZRY4 209 aaKnown RBP4.31□□□□□ -1.72
GYPB-205ENST00000505583 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 SPAG16Q8N0X2 631 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 GVQW1Q8N7I0 195 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 OR13F1Q8NGS4 319 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 OR5B3Q8NH48 314 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 VSTM2AQ8TAG5 236 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 LGALS14Q8TCE9 139 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 SECTM1Q8WVN6 248 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 TMEM190Q8WZ59 177 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 RNF183Q96D59 192 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 CHRDL1Q9BU40 450 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 DCSTAMPQ9H295 470 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 VCXQ9H320 206 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 HRASLSQ9HDD0 168 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 BET1LQ9NYM9 111 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 MRPL27Q9P0M9 148 aaKnown RBP4.31□□□□□ -1.72
GYPB-205ENST00000505583 TP53TG1Q9Y2A0 90 aa4.31□□□□□ -1.72
GYPB-205ENST00000505583 IGHV3-49A0A0A0MS15 119 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 DBX1A6NMT0 343 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 TSPAN4O14817 238 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 TGOLN2O43493 480 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 SLC22A5O76082 557 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 DHFRP00374 187 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 HRASP01112 189 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 OR13C7P0DN81 318 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 GALP22466 123 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 MYL9P24844 172 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 PTBP1P26599 531 aaKnown RBP eCLIP4.3□□□□□ -1.72
GYPB-205ENST00000505583 APOC4P55056 127 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 GNG2P59768 71 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 NANOS2P60321 138 aaKnown RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 POU2AF1Q16633 256 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 TEPPQ6URK8 271 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 ZNF818PQ6ZRF7 136 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 ZNF367Q7RTV3 350 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 LYSMD2Q8IV50 215 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 OR5H6Q8NGV6 325 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 PHLDA1Q8WV24 401 aaPredicted RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 SLC25A38Q96DW6 304 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 SPAG8Q99932 426 aaPredicted RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 WDR12Q9GZL7 423 aaKnown RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 RNF167Q9H6Y7 350 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 MAP6D1Q9H9H5 199 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 TXNL4BQ9NX01 149 aaKnown RBP4.3□□□□□ -1.72
GYPB-205ENST00000505583 DAPK2Q9UIK4 370 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 UFC1Q9Y3C8 167 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
GYPB-205ENST00000505583 TRAV18A0A075B6X5 111 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 KIR2DL5BA0A0G2JN68 375 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 KIR2DL5BA0A0G2JPC4 375 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 MEIS3P1A6NDR6 274 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 NOTOA8MTQ0 251 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 K7EIM0 57 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 UBE2CO00762 179 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 DEFB4AO15263 64 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 RBFOX2O43251 390 aaKnown RBP eCLIP4.29□□□□□ -1.72
GYPB-205ENST00000505583 HPRT1P00492 218 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 PPYP01298 95 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 SERPINE2P07093 398 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 CTSDP07339 412 aaPredicted RBP4.29□□□□□ -1.72
GYPB-205ENST00000505583 FGF9P31371 208 aaPredicted RBP4.29□□□□□ -1.72
GYPB-205ENST00000505583 TFPI2P48307 235 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 TAS2R31P59538 309 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 FXYD4P59646 89 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 ARL6IP1Q15041 203 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 LGALS9CQ6DKI2 356 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 SLC25A24Q6NUK1 477 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 SFXN4Q6P4A7 337 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 HOGA1Q86XE5 327 aa4.29□□□□□ -1.72
GYPB-205ENST00000505583 SLC38A6Q8IZM9 456 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms