RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TATDN3Q17R31 274 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 VMA21Q3ZAQ7 101 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 GGNBP1Q5YKI7 109 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 CTRB2Q6GPI1 263 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 PLET1Q6UQ28 207 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 SLC35E3Q7Z769 313 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 FAM219AQ8IW50 185 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 LGI3Q8N145 548 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 TTC9CQ8N5M4 171 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 LFNGQ8NES3 379 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 OR4D5Q8NGN0 318 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 OR52E5Q8NH55 327 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 VSTM2AQ8TAG5 236 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 ENKURQ8TC29 256 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 ARPC1AQ92747 370 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 CLCC1Q96S66 551 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 RASL11BQ9BPW5 248 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 QTRT1Q9BXR0 403 aaKnown RBP3.85□□□□□ -1.79
LMNB1-208ENST00000504788 KLK15Q9H2R5 256 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 HSPB7Q9UBY9 170 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 TMED3Q9Y3Q3 217 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 RNF114Q9Y508 228 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 IGLV11-55A0A075B6I3 123 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 HMX3A6NHT5 357 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 MSGN1A6NI15 193 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 F8W735 103 aaPredicted RBP3.84□□□□□ -1.79
LMNB1-208ENST00000504788 KCNAB3O43448 404 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 PRAF2O60831 178 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 CXCL3P19876 107 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 PAX9P55771 341 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 HSPE1P61604 102 aaKnown RBP3.84□□□□□ -1.79
LMNB1-208ENST00000504788 FOXL1Q12952 345 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 TNXAQ16473 311 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 RGS21Q2M5E4 152 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 CXorf66Q5JRM2 361 aaPredicted RBP3.84□□□□□ -1.79
LMNB1-208ENST00000504788 LCNL1Q6ZST4 164 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 ZNF329Q86UD4 541 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 KLHDC1Q8N7A1 406 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 ZNF114Q8NC26 417 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 OR4F5Q8NH21 305 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 OR5B3Q8NH48 314 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 OR2T6Q8NHC8 308 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 AIFM2Q9BRQ8 373 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 KIAA1456Q9P272 454 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 CACNG5Q9UF02 275 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 ALG5Q9Y673 324 aa3.84□□□□□ -1.79
LMNB1-208ENST00000504788 TRAV41A0A0B4J266 112 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 A0A1B0GU03 582 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 A0A1B0GUS0 222 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 PMS2P5A8MQ11 134 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 NPIPB5A8MRT5 1133 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 PRSS46E5RG02 174 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 CCSO14618 274 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 FBXO24O75426 580 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 OPN1MWP04001 364 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 APELAP0DMC3 54 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 OPN1MW2P0DN77 364 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 OPN1MW3P0DN78 364 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 S100GP29377 79 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 RPL27AP46776 148 aaKnown RBP3.84□□□□□ -1.8
LMNB1-208ENST00000504788 SRPXP78539 464 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 TNFRSF9Q07011 255 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 TRIM16LQ309B1 348 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 C4orf46Q504U0 113 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 Q6ZNX1 250 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 C18orf65Q6ZTR6 163 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 H2BFWTQ7Z2G1 175 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 ZNF695Q8IW36 515 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 C12orf45Q8N5I9 185 aaPredicted RBP3.84□□□□□ -1.8
LMNB1-208ENST00000504788 OR2C3Q8N628 320 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 DMBX1Q8NFW5 382 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 OR11H7Q8NGC8 314 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 OR5M8Q8NGP6 311 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 SPATA3Q8NHX4 192 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 FAM110DQ8TAY7 271 aaPredicted RBP3.84□□□□□ -1.8
LMNB1-208ENST00000504788 CASTOR1Q8WTX7 329 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 TMEM158Q8WZ71 300 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 TMEM68Q96MH6 324 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 SRSF8Q9BRL6 282 aaKnown RBP3.84□□□□□ -1.8
LMNB1-208ENST00000504788 PRNDQ9UKY0 176 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 RCL1Q9Y2P8 373 aaKnown RBP3.84□□□□□ -1.8
LMNB1-208ENST00000504788 WSB1Q9Y6I7 421 aa3.84□□□□□ -1.8
LMNB1-208ENST00000504788 DNAH3Q8TD57 4116 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 NBEAL1Q6ZS30 2694 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 H0YIZ8 118 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 I3L521 148 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 HOXB5P09067 269 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 RNASE2P10153 161 aaKnown RBP3.83□□□□□ -1.8
LMNB1-208ENST00000504788 CD28P10747 220 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 ANXA3P12429 323 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 PSMB6P28072 239 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 AKR1C2P52895 323 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 CBX3Q13185 183 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 SMCO1Q147U7 214 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 ZNF491Q8N8L2 437 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 ZBTB8BQ8NAP8 495 aaPredicted RBP3.83□□□□□ -1.8
LMNB1-208ENST00000504788 OR5AU1Q8NGC0 362 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms