RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TRAPPC2P0DI81 140 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 TRAPPC2BP0DI82 140 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 PF4V1P10720 104 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 ANXA7P20073 488 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 TMEM65Q6PI78 240 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 ZNF429Q86V71 674 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 TTC9CQ8N5M4 171 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 DUSP18Q8NEJ0 188 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 OR5T1Q8NG75 326 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 OR5B3Q8NH48 314 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 RNASE11Q8TAA1 199 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 FAM110DQ8TAY7 271 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 FYTTD1Q96QD9 318 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 QTRT1Q9BXR0 403 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 KLK15Q9H2R5 256 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 NDUFA4L2Q9NRX3 87 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 NUDT15Q9NV35 164 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 SHPKQ9UHJ6 478 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 ZNF257Q9Y2Q1 563 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 OR51B2Q9Y5P1 312 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 DUXBA0A1W2PPF3 345 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 HMX3A6NHT5 357 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 DBX1A6NMT0 343 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 NPIPB5A8MRT5 1133 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 DUS4LO95620 317 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 RPLP1P05386 114 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 H2AFB2P0C5Z0 115 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 OR4E1P0C645 316 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 APELAP0DMC3 54 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 RAB9AP51151 201 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 RAB25P57735 213 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 HSPE1P61604 102 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 RPL23AP62750 156 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 DHRS2Q13268 280 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 IZUMO4Q1ZYL8 232 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 ANKRD55Q3KP44 614 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 HIST2H2BDQ6DRA6 164 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 HSD17B13Q7Z5P4 300 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 LYG2Q86SG7 212 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 SLC35G3Q8N808 338 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 CASTOR1Q8WTX7 329 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 SLA2Q9H6Q3 261 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 PRR13Q9NZ81 148 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 ANK2Q01484 3957 aa9.28□□□□□ -0.92
PDLIM5-208ENST00000504489 TRAV6A0A075B6T7 132 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 IGLC7A0M8Q6 106 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 M0QZ24 198 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 HLA-AP01891 365 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 CRYGCP07315 174 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 CDX1P47902 265 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 C2orf68Q2NKX9 166 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 AARDQ4LEZ3 155 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 C4orf46Q504U0 113 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 NMSQ5H8A3 153 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 Q6ZRM9 215 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 LYZL2Q7Z4W2 148 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 NRARPQ7Z6K4 114 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 GPR146Q96CH1 333 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 PALMDQ9NP74 551 aa9.27□□□□□ -0.93
PDLIM5-208ENST00000504489 ST8SIA3O43173 380 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 RBMXL2O75526 392 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 AREGP15514 252 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 CTRB1P17538 263 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 PSMB6P28072 239 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 PRCDQ00LT1 54 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 NSUN5P1Q3KNT7 163 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 KHDC1LQ5JSQ8 128 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 CTRB2Q6GPI1 263 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 OR10W1Q8NGF6 305 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 COQ8AQ8NI60 647 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 ZNF355PQ9NSJ1 428 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 COA4Q9NYJ1 87 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 CACNG5Q9UF02 275 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 CACFD1Q9UGQ2 172 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 TMED3Q9Y3Q3 217 aa9.26□□□□□ -0.93
PDLIM5-208ENST00000504489 VWFP04275 2813 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 TRBV9A0A0B4J1U6 114 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 A0A1B0GU03 582 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 A0A1W2PRX2 142 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 INS-IGF2F8WCM5 200 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 DHFRP00374 187 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 TRGV3P03979 118 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 IL5P05113 134 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 SULT1A3P0DMM9 295 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 SULT1A4P0DMN0 295 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 OR13C7P0DN81 318 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 SLC25A6P12236 298 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 TPPP2P59282 170 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms