RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 BANF1O75531 89 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 LY6HO94772 140 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 GADD45GO95257 159 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 BPGMP07738 259 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 CCL1P22362 96 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 DDTP30046 118 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 MARCKSL1P49006 195 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 LINC00313P59037 77 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 HERVK_113P63121 156 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 RUNX1Q01196 453 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 FOXF1Q12946 379 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 CDK10Q15131 360 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 TMEM128Q5BJH2 165 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 AKR1C8PQ5T2L2 129 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 SAMD13Q5VXD3 122 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 TEX36Q5VZQ5 186 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 JOSD2Q8TAC2 188 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 DIRAS2Q96HU8 199 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 TBX5Q99593 518 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 C1QTNF6Q9BXI9 259 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 ULBP3Q9BZM4 244 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 SMDT1Q9H4I9 107 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 HES4Q9HCC6 221 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 TXNL4BQ9NX01 149 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 COPZ2Q9P299 210 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 UTP11Q9Y3A2 253 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 PRELID3BQ9Y3B1 194 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 PCYT1BQ9Y5K3 369 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 MRC2Q9UBG0 1479 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 SHANK3Q9BYB0 1731 aa2.2□□□□□ -2.06
TRAPPC13-205ENST00000504243 COL18A1P39060 1754 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 TRAV8-1A0A0A6YYK1 113 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 BORCS7-ASMTA0A0B4J1R7 106 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 IGHV3-73A0A0B4J1V6 119 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 PRORSD1PA6NEY8 169 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 TRAPPC2LH3BP13 241 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 K7EP13 123 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 UBE2L6O14933 153 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 GSTZ1O43708 216 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 OR5G3P0C626 314 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 TSPAN19P0C672 248 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 IGHV3-30-3P0DP02 117 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 FUSP35637 526 aaKnown RBP eCLIP2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 AKR1C3P42330 323 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 RAB13P51153 203 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 TAS2R45P59539 299 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 SMIM21Q3B7S5 101 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 ACOT6Q3I5F7 207 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 C9orf64Q5T6V5 341 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 GLT6D1Q7Z4J2 308 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 LRRC28Q86X40 367 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 SMIM20Q8N5G0 67 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 DEFB125Q8N687 156 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 ZNF676Q8N7Q3 588 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 OR2T4Q8NH00 348 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 OR4K15Q8NH41 348 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 OR4X1Q8NH49 305 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 SLC35G5Q96KT7 338 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 SERPINI1Q99574 410 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 C12orf57Q99622 126 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 VPS25Q9BRG1 176 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 GINS3Q9BRX5 216 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 RASL12Q9NYN1 266 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 PKIGQ9Y2B9 76 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 SLC35A3Q9Y2D2 325 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 ASB4Q9Y574 426 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 ZNF518AQ6AHZ1 1483 aa2.19□□□□□ -2.06
TRAPPC13-205ENST00000504243 PIK3C2GO75747 1445 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 SOGA1O94964 1423 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 WRNQ14191 1432 aaPredicted RBP eCLIP2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 PPIP5K1Q6PFW1 1433 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 SMG6Q86US8 1419 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 CNTLNQ9NXG0 1405 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 PRDM2Q13029 1718 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 TMED7-TICAM2A0A0A6YYA0 188 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 DHRS12A0PJE2 317 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 MAP1LC3B2A6NCE7 125 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 OR4C46A6NHA9 309 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 LINC00587B1AMM8 73 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 EEF1E1-BLOC1S5C9J1V9 151 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 C5orf58C9J3I9 102 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 FNDC10F2Z333 226 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 M0R381 172 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 AIPO00170 330 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 UBFD1O14562 309 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 IFNGP01579 166 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 S100A8P05109 93 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 CD7P09564 240 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 SMIM6P0DI80 62 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 BLVRBP30043 206 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 PHBP35232 272 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 CA7P43166 264 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 PSMD8P48556 350 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 DAPP51397 102 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 PIGPP57054 158 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 TSPEAR-AS2P59090 65 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 TPI1P60174 286 aa2.18□□□□□ -2.06
TRAPPC13-205ENST00000504243 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms