RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 CHRNA7P36544 502 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 CRIP2P52943 208 aaPredicted RBP7.86□□□□□ -1.15
NUP54-203ENST00000504173 AKIRIN2Q53H80 203 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 THOC7Q6I9Y2 204 aaKnown RBP7.86□□□□□ -1.15
NUP54-203ENST00000504173 C10orf99Q6UWK7 81 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 REC114Q7Z4M0 266 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 C1QL4Q86Z23 238 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 OR5AU1Q8NGC0 362 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 OR4X2Q8NGF9 303 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 OR1L8Q8NGR8 309 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 ZNF431Q8TF32 576 aaPredicted RBP7.86□□□□□ -1.15
NUP54-203ENST00000504173 MITD1Q8WV92 249 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 GPR146Q96CH1 333 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 TMEM68Q96MH6 324 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 MARVELD1Q9BSK0 173 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 PDCD10Q9BUL8 212 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 HINT2Q9BX68 163 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 QTRT1Q9BXR0 403 aaKnown RBP7.86□□□□□ -1.15
NUP54-203ENST00000504173 GPN1Q9HCN4 374 aaPredicted RBP7.86□□□□□ -1.15
NUP54-203ENST00000504173 FOXA2Q9Y261 457 aaPredicted RBP7.86□□□□□ -1.15
NUP54-203ENST00000504173 TMED3Q9Y3Q3 217 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 NOTCH3Q9UM47 2321 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 TEX50A0A1B0GTY4 177 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 HMX3A6NHT5 357 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 DBX1A6NMT0 343 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 TEX22C9J3V5 150 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 E7EUB6 86 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 ST8SIA3O43173 380 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 FBXO24O75426 580 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 IFNA17P01571 189 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 TRAPPC2P0DI81 140 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 TRAPPC2BP0DI82 140 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 SULT1A3P0DMM9 295 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 SULT1A4P0DMN0 295 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 KRTAP10-3P60369 221 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 CFHR3Q02985 330 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 C19orf54Q5BKX5 351 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 NMSQ5H8A3 153 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 GGNBP1Q5YKI7 109 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 TEX38Q6PEX7 206 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 ZNF429Q86V71 674 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 COMMD1Q8N668 190 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 C11orf44Q8N8P7 122 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 UXS1Q8NBZ7 420 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 OR5T1Q8NG75 326 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 OR5B3Q8NH48 314 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 WIPF2Q8TF74 440 aaPredicted RBP7.85□□□□□ -1.15
NUP54-203ENST00000504173 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.85□□□□□ -1.15
NUP54-203ENST00000504173 ZNF257Q9Y2Q1 563 aa7.85□□□□□ -1.15
NUP54-203ENST00000504173 A0A1B0GU03 582 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 A0A1B0GW64 132 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 CGB1A6NKQ9 187 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 M0QZ24 198 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 IFNA21P01568 189 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 IGHG4P01861 327 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 PF4V1P10720 104 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 CD28P10747 220 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 PPIFP30405 207 aaKnown RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 SRSF4Q08170 494 aaKnown RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 FOXE3Q13461 319 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 SMCO1Q147U7 214 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 KHDC1LQ5JSQ8 128 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 ASPHD1Q5U4P2 390 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 TMEM65Q6PI78 240 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 Q6ZRM9 215 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 C12orf45Q8N5I9 185 aaPredicted RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 MINDY2Q8NBR6 621 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 OR5M8Q8NGP6 311 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 OR1S1Q8NH92 325 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 FAM110DQ8TAY7 271 aaPredicted RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 SRSF8Q9BRL6 282 aaKnown RBP7.84□□□□□ -1.15
NUP54-203ENST00000504173 PLEKHA3Q9HB20 300 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 NDUFA4L2Q9NRX3 87 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 ZNF355PQ9NSJ1 428 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 COA4Q9NYJ1 87 aa7.84□□□□□ -1.15
NUP54-203ENST00000504173 TCRBV4S1A1TA0A5B7 111 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 IGLC7A0M8Q6 106 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 SNRPGP15A8MWD9 76 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 SOX15O60248 233 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 ADAP1O75689 374 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 NXPH3O95157 252 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 REG1AP05451 166 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 ELANEP08246 267 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 OR13C7P0DN81 318 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 AREGP15514 252 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 HOXA1P49639 335 aaPredicted RBP7.83□□□□□ -1.16
NUP54-203ENST00000504173 PRCDQ00LT1 54 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 BEAN1Q3B7T3 259 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 SPINK9Q5DT21 86 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 CXorf66Q5JRM2 361 aaPredicted RBP7.83□□□□□ -1.16
NUP54-203ENST00000504173 HSD17B13Q7Z5P4 300 aaPredicted RBP7.83□□□□□ -1.16
NUP54-203ENST00000504173 MRPL41Q8IXM3 137 aaKnown RBP7.83□□□□□ -1.16
NUP54-203ENST00000504173 TTC9CQ8N5M4 171 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 OR10W1Q8NGF6 305 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 CITED1Q99966 193 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 ENY2Q9NPA8 101 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 CACFD1Q9UGQ2 172 aa7.83□□□□□ -1.16
NUP54-203ENST00000504173 TET2Q6N021 2002 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms