RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 SPATA2Q9UM82 520 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 CELA1Q9UNI1 258 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 OR2W1Q9Y3N9 320 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 X6R8D5 127 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 AGRNO00468 2067 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 HLA-DQB1P01920 261 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 CD5P06127 495 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 TALDO1P37837 337 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 TIMM50Q3ZCQ8 353 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 MORN3Q6PF18 240 aaPredicted RBP11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 GDPD1Q8N9F7 314 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 SCRT1Q9BWW7 348 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 COMMD5Q9GZQ3 224 aa11.38□□□□□ -0.59
PDLIM7-210ENST00000503827 IGHV3-21A0A0B4J1V1 117 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 DNASE2O00115 360 aaPredicted RBP11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 YIF1AO95070 293 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 SPP1P10451 314 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 RANBP1P43487 201 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 BRWD1-AS2P59051 145 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 C2orf76Q3KRA6 126 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 Q56UQ5 140 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 Q6ZS49 121 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 TCF24Q7RTU0 167 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 MFSD4AQ8N468 514 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 SCARB1Q8WTV0 552 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 GIMAP1Q8WWP7 306 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 TBC1D24Q9ULP9 559 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
PDLIM7-210ENST00000503827 A0A075B6Q4 140 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 TRAV14DV4A0A0A6YYC5 116 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 EIF4EP06730 217 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 SERPINE2P07093 398 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 UCHL1P09936 223 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 GNB3P16520 340 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 NFYAP23511 347 aaPredicted RBP11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 GADD45AP24522 165 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 CLDN12P56749 244 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 TNP2Q05952 138 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 RNF212Q495C1 297 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 THOC7Q6I9Y2 204 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 ZFP1Q6P2D0 407 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 OR10W1Q8NGF6 305 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 FAM3DQ96BQ1 224 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 OR10C1Q96KK4 312 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 GFI1Q99684 422 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 QTRT1Q9BXR0 403 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 TMEM14BQ9NUH8 114 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 TAS2R8Q9NYW2 309 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 RAB22AQ9UL26 194 aa11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 AK6Q9Y3D8 172 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-210ENST00000503827 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 IGKV1D-8A0A087WSZ0 117 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 F8W735 103 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 MFNGO00587 321 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 NUPL2O15504 423 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 ZNF66Q6ZN08 573 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 HSD17B13Q7Z5P4 300 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 TRPT1Q86TN4 253 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 OR10R2Q8NGX6 335 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
PDLIM7-210ENST00000503827 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 IGKV1D-13A0A0B4J2D9 117 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 UPK2O00526 184 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 CTSGP08311 255 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 CTXN2P0C2S0 81 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 IGKV1-13P0DP09 117 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 C4BPBP20851 252 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
PDLIM7-210ENST00000503827 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 ST8SIA3O43173 380 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 TRAPPC2P0DI81 140 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 TRAPPC2BP0DI82 140 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 HIST1H1DP16402 221 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 RPL11P62913 178 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 WT1-ASQ06250 92 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 DUSP18Q8NEJ0 188 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 LRP1BQ9NZR2 4599 aa11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-210ENST00000503827 K7EIM0 57 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 ATP5HO75947 161 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 FGF2P09038 288 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 TAS2R31P59538 309 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 AHSA2Q719I0 299 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 ZNF367Q7RTV3 350 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 SPAG16Q8N0X2 631 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 ZNF414Q96IQ9 312 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 GPHA2Q96T91 129 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms