RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 LY6HO94772 140 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 HRASP01112 189 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 KRASP01116 189 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 IGHV3-7P01780 117 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 APOA2P02652 100 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 IFNA4P05014 189 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 FAM157CP0CG43 387 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 SAA2P0DJI9 122 aaPredicted RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 NQO2P16083 231 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 RPL12P30050 165 aaKnown RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 DLX6P56179 175 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 DSCR9P59020 149 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 RPL23AP62750 156 aaKnown RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 RTL8BQ17RB0 113 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 RPL39P5Q59GN2 51 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 OR2B11Q5JQS5 317 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 NCR3LG1Q68D85 454 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 DHRS7BQ6IAN0 325 aaPredicted RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 PRSS57Q6UWY2 283 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 C1orf122Q6ZSJ8 110 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 LRRC75A-AS1Q8N1F1 130 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 ABHD12Q8N2K0 398 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 SVBPQ8N300 66 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 LY6G5BQ8NDX9 201 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 OR13D1Q8NGV5 346 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 OR10X1Q8NGY0 326 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 OR4S2Q8NH73 311 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 LEAP2Q969E1 77 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 C5orf30Q96GV9 206 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 RAB40CQ96S21 281 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF471Q9BX82 626 aaPredicted RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 CLEC7AQ9BXN2 247 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 NKX6-2Q9C056 277 aaPredicted RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 BIN3Q9NQY0 253 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 AMMECR1Q9Y4X0 333 aaPredicted RBP4.29□□□□□ -1.72
HMGXB4-208ENST00000498325 PLCE1Q9P212 2302 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 DSCAML1Q8TD84 2053 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 BORCS7-ASMTA0A0B4J1R7 106 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 RNF222A6NCQ9 220 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF98A6NK75 572 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 TXNL1O43396 289 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 SYNGR2O43760 224 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ENSAO43768 121 aaKnown RBP4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 CHST1O43916 411 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 RAMP3O60896 148 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 NDUFS7O75251 213 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 FOXH1O75593 365 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 FCN3O75636 299 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 S1PR2O95136 353 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 APOC3P02656 99 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ELANEP08246 267 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 MC5RP33032 325 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 G6PCP35575 357 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 TAS2R30P59541 319 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ARF6P62330 175 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 POLR2GP62487 172 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 CXorf66Q5JRM2 361 aaPredicted RBP4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 CLEC2AQ6UVW9 174 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ALKAL2Q6UX46 152 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF833PQ6ZTB9 187 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 TGIF2LXQ8IUE1 241 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ODF3L1Q8IXM7 274 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 OR2C3Q8N628 320 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 KIR3DL3Q8N743 410 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 OR4A16Q8NH70 328 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 MARC2Q969Z3 335 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 PERPQ96FX8 193 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 CLCC1Q96S66 551 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF251Q9BRH9 671 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 PIMREGQ9BSJ6 248 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 PCGF1Q9BSM1 259 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 SLC35D1Q9NTN3 355 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 ONECUT1Q9UBC0 465 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 CACNG5Q9UF02 275 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 MLXQ9UH92 298 aa4.28□□□□□ -1.72
HMGXB4-208ENST00000498325 IGHV2-26A0A0B4J1V2 119 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 A0A0G2JRQ6 117 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 SSSCA1O60232 199 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 JTBO76095 146 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 SNAPINO95295 136 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV2-5P01817 119 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV4-39P01824 125 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 GAPDHP04406 335 aaKnown RBP4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 CT45A6P0DMU7 189 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 CT45A5P0DMU8 189 aa4.27□□□□□ -1.73
HMGXB4-208ENST00000498325 CT45A7P0DMV0 189 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms