RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ZNF329Q86UD4 541 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 MRPL41Q8IXM3 137 aaKnown RBP9.01□□□□□ -0.97
CTTN-208ENST00000498223 OR5T1Q8NG75 326 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 OR5B3Q8NH48 314 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 TMEM14BQ9NUH8 114 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 COA4Q9NYJ1 87 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 FOXA2Q9Y261 457 aaPredicted RBP9.01□□□□□ -0.97
CTTN-208ENST00000498223 ALG5Q9Y673 324 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 DBX1A6NMT0 343 aa9□□□□□ -0.97
CTTN-208ENST00000498223 CEBPZOSA8MTT3 80 aa9□□□□□ -0.97
CTTN-208ENST00000498223 GOSR2O14653 212 aa9□□□□□ -0.97
CTTN-208ENST00000498223 IGF1P05019 195 aa9□□□□□ -0.97
CTTN-208ENST00000498223 REG1AP05451 166 aa9□□□□□ -0.97
CTTN-208ENST00000498223 P0C879 139 aa9□□□□□ -0.97
CTTN-208ENST00000498223 PF4V1P10720 104 aa9□□□□□ -0.97
CTTN-208ENST00000498223 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
CTTN-208ENST00000498223 SSBP2P81877 361 aaPredicted RBP9□□□□□ -0.97
CTTN-208ENST00000498223 AKIRIN2Q53H80 203 aa9□□□□□ -0.97
CTTN-208ENST00000498223 KHDC1LQ5JSQ8 128 aa9□□□□□ -0.97
CTTN-208ENST00000498223 TMEM65Q6PI78 240 aa9□□□□□ -0.97
CTTN-208ENST00000498223 GSG1LQ6UXU4 331 aa9□□□□□ -0.97
CTTN-208ENST00000498223 Q6ZRM9 215 aa9□□□□□ -0.97
CTTN-208ENST00000498223 OR5AU1Q8NGC0 362 aa9□□□□□ -0.97
CTTN-208ENST00000498223 OR10W1Q8NGF6 305 aa9□□□□□ -0.97
CTTN-208ENST00000498223 OR4X2Q8NGF9 303 aa9□□□□□ -0.97
CTTN-208ENST00000498223 TMEM68Q96MH6 324 aa9□□□□□ -0.97
CTTN-208ENST00000498223 PLEKHA3Q9HB20 300 aa9□□□□□ -0.97
CTTN-208ENST00000498223 GSKIPQ9P0R6 139 aa9□□□□□ -0.97
CTTN-208ENST00000498223 CACFD1Q9UGQ2 172 aa9□□□□□ -0.97
CTTN-208ENST00000498223 ZNF257Q9Y2Q1 563 aa9□□□□□ -0.97
CTTN-208ENST00000498223 E7EUB6 86 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 WRBO00258 174 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 SCGB1D2O95969 90 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 OR13C7P0DN81 318 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 SLC25A6P12236 298 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 DEFA4P12838 97 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 PROK1P58294 105 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 ERHP84090 104 aaKnown RBP8.99□□□□□ -0.97
CTTN-208ENST00000498223 IAH1Q2TAA2 248 aaPredicted RBP8.99□□□□□ -0.97
CTTN-208ENST00000498223 CXorf66Q5JRM2 361 aaPredicted RBP8.99□□□□□ -0.97
CTTN-208ENST00000498223 ZNF429Q86V71 674 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 C11orf44Q8N8P7 122 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 MED28Q9H204 178 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 NDUFA4L2Q9NRX3 87 aa8.99□□□□□ -0.97
CTTN-208ENST00000498223 MPTX1A8MV57 137 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 TEX22C9J3V5 150 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 FBXO24O75426 580 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 MED6O75586 246 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 AREGP15514 252 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
CTTN-208ENST00000498223 SPCS3P61009 180 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 PRCDQ00LT1 54 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 TEX38Q6PEX7 206 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 C10orf99Q6UWK7 81 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 HSD17B13Q7Z5P4 300 aaPredicted RBP8.98□□□□□ -0.97
CTTN-208ENST00000498223 OR5M8Q8NGP6 311 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 OR10C1Q96KK4 312 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 MS4A10Q96PG2 267 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 SRSF8Q9BRL6 282 aaKnown RBP8.98□□□□□ -0.97
CTTN-208ENST00000498223 WNT10AQ9GZT5 417 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 HEYLQ9NQ87 328 aaPredicted RBP8.98□□□□□ -0.97
CTTN-208ENST00000498223 MGAT4CQ9UBM8 478 aa8.98□□□□□ -0.97
CTTN-208ENST00000498223 TENM1Q9UKZ4 2725 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 A0A1B0GW64 132 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 TCRBV4S1A1TA0A5B7 111 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 C7orf66A4D0T2 115 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 CGB1A6NKQ9 187 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 CYB5BO43169 146 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 SIX6O95475 246 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 PSMB6P28072 239 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 SNCAP37840 140 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 NKX2-1P43699 371 aaPredicted RBP8.97□□□□□ -0.97
CTTN-208ENST00000498223 TNFRSF9Q07011 255 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 ASPHD1Q5U4P2 390 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 TTC9CQ8N5M4 171 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 COMMD1Q8N668 190 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 ZBTB8BQ8NAP8 495 aaPredicted RBP8.97□□□□□ -0.97
CTTN-208ENST00000498223 OR52E5Q8NH55 327 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 FAM110DQ8TAY7 271 aaPredicted RBP8.97□□□□□ -0.97
CTTN-208ENST00000498223 C2orf50Q96LR7 162 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 MAGT1Q9H0U3 335 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 HIPK2Q9H2X6 1198 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 RBKSQ9H477 322 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 ZNF580Q9UK33 172 aa8.97□□□□□ -0.97
CTTN-208ENST00000498223 IGLC7A0M8Q6 106 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 NPIPB5A8MRT5 1133 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 IGHG4P01861 327 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 TRGV3P03979 118 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 ELANEP08246 267 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 CD28P10747 220 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 PPIFP30405 207 aaKnown RBP8.96□□□□□ -0.98
CTTN-208ENST00000498223 SUB1P53999 127 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTTN-208ENST00000498223 TPPP2P59282 170 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 FOXE3Q13461 319 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 C2orf68Q2NKX9 166 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 SLC25A24Q6NUK1 477 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 LCNL1Q6ZST4 164 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 DTD1Q8TEA8 209 aa8.96□□□□□ -0.98
CTTN-208ENST00000498223 WFDC12Q8WWY7 111 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms