RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 THYN1Q9P016 225 aa6.42□□□□□ -1.38
HMGXB4-207ENST00000498212 TEX50A0A1B0GTY4 177 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 ZNF320A2RRD8 509 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 MFSD2BA6NFX1 497 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 C3orf84H3BNL1 204 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 CYB5BO43169 146 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 SNAPC5O75971 98 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 GABARAPO95166 117 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 KRASP01116 189 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 CLEC3BP05452 202 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 SERPINE2P07093 398 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 SMIM18P0DKX4 95 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 FOLR2P14207 255 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 EDN2P20800 178 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 CD81P60033 236 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 DEFB114Q30KQ6 69 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 ZNF585BQ52M93 769 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 PHLDA2Q53GA4 152 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 HSD17B13Q7Z5P4 300 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 LAX1Q8IWV1 398 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 GDPD1Q8N9F7 314 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 OR10W1Q8NGF6 305 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 OR1L8Q8NGR8 309 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 MUC7Q8TAX7 377 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 NAA50Q9GZZ1 169 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 TUBA4BQ9H853 241 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 FAM212BQ9NTI7 297 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 TECRQ9NZ01 308 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 NSG2Q9Y328 171 aa6.41□□□□□ -1.38
HMGXB4-207ENST00000498212 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 A8MWP6 167 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 M0QYG6 137 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 TPPPO94811 219 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 OR13C7P0DN81 318 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 ZNF182P17025 639 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 CBLN1P23435 193 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 PTBP1P26599 531 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 GPR183P32249 361 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 UCP3P55916 312 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 WT1-ASQ06250 92 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 CTF1Q16619 201 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 GUCA2BQ16661 112 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 RNASE12Q5GAN4 147 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 GPR107Q5VW38 600 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 SLC25A24Q6NUK1 477 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 PLET1Q6UQ28 207 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 TBC1D26Q86UD7 250 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 SLC38A6Q8IZM9 456 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 CADM3Q8N126 398 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 OR5B3Q8NH48 314 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 ZNF502Q8TBZ5 544 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 VN1R17PQ8TDU5 208 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 CACNG8Q8WXS5 425 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 LSM10Q969L4 123 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 TMEM56Q96MV1 263 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 TSC22D3Q99576 134 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 NEURL2Q9BR09 285 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 SPATA25Q9BR10 227 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 HINT2Q9BX68 163 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 MRPS26Q9BYN8 205 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 PLEKHA3Q9HB20 300 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 ZC4H2Q9NQZ6 224 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 NDUFA4L2Q9NRX3 87 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 SLC2A8Q9NY64 477 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 FKBP11Q9NYL4 201 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 EXTL2Q9UBQ6 330 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 KLK11Q9UBX7 282 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 PRNDQ9UKY0 176 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 OR51B2Q9Y5P1 312 aa6.4□□□□□ -1.38
HMGXB4-207ENST00000498212 TMEM213A2RRL7 107 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 IFNA6P05013 189 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 CD7P09564 240 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 HAGHQ16775 308 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 RNASE10Q5GAN6 216 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 ZNF57Q68EA5 555 aaPredicted RBP6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 UNQ9165/PRO28630Q6UXU0 137 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 GPR141Q7Z602 305 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 CITED4Q96RK1 184 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 PALMDQ9NP74 551 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 MLXQ9UH92 298 aa6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 F11RQ9Y624 299 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-207ENST00000498212 IGHV3-35A0A0C4DH35 117 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 OR2T8A6NH00 312 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 DBX1A6NMT0 343 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 OR11H12B2RN74 326 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 RGS5O15539 181 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 TGOLN2O43493 480 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 IGKV1-39P01597 117 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 CD3DP04234 171 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 IGKV1D-39P04432 117 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 PGAM2P15259 253 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 MFAP2P55001 183 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 ELLP55199 621 aaPredicted RBP6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 RND3P61587 244 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 TM4SF20Q53R12 229 aa6.38□□□□□ -1.39
HMGXB4-207ENST00000498212 CASC10Q5T4H9 136 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms