RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 Q6P435 159 aa6.71□□□□□ -1.34
HLA-DMB-262ENST00000498020 FGFRL1Q8N441 504 aa6.71□□□□□ -1.34
HLA-DMB-262ENST00000498020 CARHSP1Q9Y2V2 147 aaKnown RBP6.71□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 PPIAL4CA0A0B4J2A2 164 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGSF23A1L1A6 192 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 C12orf77C9JDV5 145 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 WNT9BO14905 357 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 SCGB1C2P0DMR2 95 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 PPIAL4GP0DN37 164 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 PLA2G2AP14555 144 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 DPPA3Q6W0C5 159 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 RBFOX3A6NFN3 312 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 SIGLEC5O15389 551 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 HOXA4Q00056 320 aaPredicted RBP6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 PSG5Q15238 335 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM24BQ8N5W8 94 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR10A7Q8NGE5 316 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR10G8Q8NGN5 311 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 C12orf57Q99622 126 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGKV3-15P01624 115 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 ARG1P05089 322 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM157CP0CG43 387 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 TIMP3P35625 211 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 B2MP61769 119 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 HERPUD1Q15011 391 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 RPEL1Q2QD12 228 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM201AQ5SY85 155 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR2T10Q8NGZ9 312 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 C8orf46Q8TAG6 207 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 VPS25Q9BRG1 176 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 PRORYQ9H606 182 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
HLA-DMB-262ENST00000498020 EYSQ5T1H1 3165 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 ODAMA1E959 279 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 NPIPB11E5RHQ5 1161 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 GRNP28799 593 aaKnown RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 GLIPR1P48060 266 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 FGF8P55075 233 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR4P4Q8NGL7 312 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 SSMEM1Q8WWF3 244 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 STARD4Q96DR4 205 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 CYYR1Q96J86 154 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MS4A10Q96PG2 267 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 SRD5A3Q9H8P0 318 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 WASHC3Q9Y3C0 194 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 UFC1Q9Y3C8 167 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 C11orf94C9JXX5 98 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 J3QR06 171 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 BMPR1BO00238 502 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 THBDP07204 575 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 G6PCP35575 357 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 ERVFRD-1P60508 538 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGFL2Q6UWQ7 119 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 WDR82Q6UXN9 313 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM90A1Q86YD7 464 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR4X1Q8NH49 305 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 PRR14LQ5THK1 2151 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 BAHCC1Q9P281 2608 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MBD3L4A6NDZ8 208 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MBD3L3A6NE82 208 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MBD3L5A6NJ08 208 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM74A7A6NL05 159 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 EFNA4P52798 201 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 SERF2P84101 59 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM74A3Q4VXF1 159 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 NMSQ5H8A3 153 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 SLC35E3Q7Z769 313 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 LDLRAD3Q86YD5 345 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MBD3L2Q8NHZ7 208 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 NEUROG1Q92886 237 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 VAX2Q9UIW0 290 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 TRAV40A0A0B4J280 105 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGHV1-18A0A0C4DH31 117 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 RAB29O14966 203 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 P01737 135 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 PRSS1P07477 247 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 ACAA1P09110 424 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 RUNX1Q01196 453 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 CR1LQ2VPA4 569 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MBNL2Q5VZF2 373 aaKnown RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 TEPPQ6URK8 271 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 PCSK4Q6UW60 755 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 CBLN2Q8IUK8 224 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM169BQ8N8A8 192 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR10D4PQ8NGN7 298 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 FGF23Q9GZV9 251 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 SH3BGRL3Q9H299 93 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 MIOXQ9UGB7 285 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 IL19Q9UHD0 177 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 RABAC1Q9UI14 185 aa6.69□□□□□ -1.34
HLA-DMB-262ENST00000498020 CPAMD8Q8IZJ3 1885 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGKV1-6A0A0C4DH72 117 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 B4DSR2 109 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 ZNF253O75346 499 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 HTN1P15515 57 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 RIGQ13278 110 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 IZUMO4Q1ZYL8 232 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 ATRAIDQ6UW56 229 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 RBPMS2Q6ZRY4 209 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms