RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 EVC2Q86UK5 1308 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 FUOMA2VDF0 154 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 TMEM212A6NML5 194 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 LST1O00453 97 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 CXCR6O00574 342 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 C8orf88P0DMB2 117 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 RPS4Y1P22090 263 aaKnown RBP0.93□□□□□ -2.26
PSPC1-205ENST00000497722 FXYD2P54710 66 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 TCL1AP56279 114 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 RUNX1Q01196 453 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 DMTNQ08495 405 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 DHFR2Q86XF0 187 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 C12orf29Q8N999 325 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 TMEM106AQ96A25 262 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 YIPF3Q9GZM5 350 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 IL36BQ9NZH7 164 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 BAIAP2Q9UQB8 552 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 ATP6V1DQ9Y5K8 247 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 MYH11P35749 1972 aa0.93□□□□□ -2.26
PSPC1-205ENST00000497722 SCAF11Q99590 1463 aaKnown RBP0.92□□□□□ -2.26
PSPC1-205ENST00000497722 SDK1Q7Z5N4 2213 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 RTTNQ86VV8 2226 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 PTPRSQ13332 1948 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 TRBV20OR9-2A0A075B6H5 130 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 FABP5P3A8MUU1 101 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 C1QAP02745 245 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 PRM2P04554 102 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 KRT7P08729 469 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 CCL5P13501 91 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 CCL1P22362 96 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 IQCF2Q8IXL9 164 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 GPR32P1Q8NGA4 272 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 OR51D1Q8NGF3 324 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 C11orf40Q8WZ69 217 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 REG4Q9BYZ8 158 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 EFCAB1Q9HAE3 211 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 CCDC88CQ9P219 2028 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 CPAMD8Q8IZJ3 1885 aa0.92□□□□□ -2.26
PSPC1-205ENST00000497722 HELZ2Q9BYK8 2649 aaKnown RBP0.92□□□□□ -2.26
PSPC1-205ENST00000497722 TTC21AQ8NDW8 1320 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 IGKV1-9A0A0C4DH69 117 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 EVPLLA8MZ36 301 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 IBA57-AS1B1ANH7 110 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 ACOX3O15254 700 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 OR5F1O95221 314 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 KRT75O95678 551 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 FGF6P10767 208 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 MARCKSL1P49006 195 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 NAA20P61599 178 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 TNFAIP6P98066 277 aaPredicted RBP0.91□□□□□ -2.26
PSPC1-205ENST00000497722 IFITM2Q01629 132 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 STX5Q13190 355 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 COTL1Q14019 142 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 ZNF345Q14585 488 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 LPCAT4Q643R3 524 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 DPPA3Q6W0C5 159 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 ZNF550Q7Z398 422 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 C15orf53Q8NAA6 179 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 ODF3Q96PU9 254 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 MRPL57Q9BQC6 102 aaKnown RBP0.91□□□□□ -2.26
PSPC1-205ENST00000497722 OR8D2Q9GZM6 311 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 TRABDQ9H4I3 376 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 CUL9Q8IWT3 2517 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 GREB1Q4ZG55 1949 aa0.91□□□□□ -2.26
PSPC1-205ENST00000497722 ZFHX2Q9C0A1 2572 aaPredicted RBP0.91□□□□□ -2.26
PSPC1-205ENST00000497722 SETD5Q9C0A6 1442 aa0.9□□□□□ -2.26
PSPC1-205ENST00000497722 MYOFQ9NZM1 2061 aa0.9□□□□□ -2.26
PSPC1-205ENST00000497722 TRAPPC2LH3BP13 241 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 DCTN3O75935 186 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 ISG15P05161 165 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 CALB1P05937 261 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 SUPT4H1P63272 117 aaKnown RBP0.9□□□□□ -2.27
PSPC1-205ENST00000497722 BPIFA4PQ86YQ2 179 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 DEFB125Q8N687 156 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 OTUD6BQ8N6M0 293 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 OR2T4Q8NH00 348 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 DNAJC9Q8WXX5 260 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 COMMD5Q9GZQ3 224 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 OR51I1Q9H343 314 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 CKLFQ9UBR5 152 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 KIF24Q5T7B8 1368 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 FREM1Q5H8C1 2179 aa0.9□□□□□ -2.27
PSPC1-205ENST00000497722 FLG2Q5D862 2391 aaPredicted RBP0.9□□□□□ -2.27
PSPC1-205ENST00000497722 NUMA1Q14980 2115 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 KMT2BQ9UMN6 2715 aaPredicted RBP0.89□□□□□ -2.27
PSPC1-205ENST00000497722 MAP3K5Q99683 1374 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 A0A0J9YY10 115 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 A0A1B0GX78 115 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 GEMIN2O14893 280 aaKnown RBP0.89□□□□□ -2.27
PSPC1-205ENST00000497722 SHBGP04278 402 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 DEFB115Q30KQ5 88 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 C10orf55Q5SWW7 151 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 IBA57Q5T440 356 aaKnown RBP0.89□□□□□ -2.27
PSPC1-205ENST00000497722 AADACL3Q5VUY0 350 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 OOSP2Q86WS3 158 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 TMEM156Q8N614 296 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 DDI1Q8WTU0 396 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 OPTNQ96CV9 577 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 SCGB3A1Q96QR1 104 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 LLPHQ9BRT6 129 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms