RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 PARD6GQ9BYG4 376 aaPredicted RBP1.19□□□□□ -2.22
PHC3-216ENST00000497171 WDR61Q9GZS3 305 aaKnown RBP1.19□□□□□ -2.22
PHC3-216ENST00000497171 PKIGQ9Y2B9 76 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 MAP3K5Q99683 1374 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 PTPRSQ13332 1948 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 FABP5P3A8MUU1 101 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 IGHV3-7P01780 117 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 PRM2P04554 102 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 RPS17P08708 135 aaKnown RBP1.18□□□□□ -2.22
PHC3-216ENST00000497171 RPS4Y1P22090 263 aaKnown RBP1.18□□□□□ -2.22
PHC3-216ENST00000497171 AKR1C3P42330 323 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 EVX1P49640 407 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 CEBPGP53567 150 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 DEFA1P59665 94 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 HIST3H3Q16695 136 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 NDUFA5Q16718 116 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 FAM173BQ6P4H8 233 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 Q6ZS49 121 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 MCFD2Q8NI22 146 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 Q96M85 177 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 NAA38Q9BRA0 125 aaKnown RBP1.18□□□□□ -2.22
PHC3-216ENST00000497171 CISHQ9NSE2 258 aa1.18□□□□□ -2.22
PHC3-216ENST00000497171 MUC6Q6W4X9 2439 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 DCCP43146 1447 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 IRGMA1A4Y4 181 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 TRAPPC2LH3BP13 241 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 CIAO1O76071 339 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 IFNA16P05015 189 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 OR5G3P0C626 314 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 UBBP0CG47 229 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 ZNF705BP0CI00 300 aaPredicted RBP1.17□□□□□ -2.22
PHC3-216ENST00000497171 PSME3P61289 254 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 UBE2IP63279 158 aaKnown RBP1.17□□□□□ -2.22
PHC3-216ENST00000497171 IFITM2Q01629 132 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 OR2F1Q13607 317 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 KCNJ8Q15842 424 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 MOGQ16653 247 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 ARHGAP11BQ3KRB8 267 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 AADACL3Q5VUY0 350 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 TRAPPC5Q8IUR0 188 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 TMEM86BQ8N661 226 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 ANKRD29Q8N6D5 301 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 MNS1Q8NEH6 495 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 PPP1R2P1Q96PQ5 205 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 HSPB9Q9BQS6 159 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 ULBP3Q9BZM4 244 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 COMMD5Q9GZQ3 224 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 CPAMD8Q8IZJ3 1885 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 SNAPC4Q5SXM2 1469 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 GREB1Q4ZG55 1949 aa1.17□□□□□ -2.22
PHC3-216ENST00000497171 SORL1Q92673 2214 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 DISP1Q96F81 1524 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 PTPRBP23467 1997 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 TRBV6-5A0A0K0K1A5 114 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 TRBV10-2A0A0K0K1G8 114 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 OR51F1A6NGY5 319 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 GOLGA6L19H0YKK7 550 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 SDCBPO00560 298 aaPredicted RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 RPP14O95059 124 aaKnown RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 HLA-DRB1P01911 266 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 PRB1P04280 392 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 NFYAP23511 347 aaPredicted RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BOP23527 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BBP33778 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 OMPP47874 163 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BDP58876 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BCP62807 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 SUPT4H1P63272 117 aaKnown RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 HBA1P69905 142 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 CCL20P78556 96 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 ELOBQ15370 118 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST2H2BEQ16778 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 IMPG1Q17R60 797 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 SPOPLQ6IQ16 392 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 ALKAL1Q6UXT8 129 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 FP248Q71RG6 208 aaPredicted RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 DCXRQ7Z4W1 244 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 RPS19BP1Q86WX3 136 aaKnown RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 BPIFA4PQ86YQ2 179 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 DYNAPQ8N1N2 210 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 LRRC25Q8N386 305 aaPredicted RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 DEFB119Q8N690 84 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 WFDC11Q8NEX6 87 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 OR8B3Q8NGG8 313 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 MRPL30Q8TCC3 161 aaKnown RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 MBD3L1Q8WWY6 194 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 DNAJC9Q8WXX5 260 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BHQ93079 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 DCUN1D1Q96GG9 259 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 OR52E6Q96RD3 313 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BNQ99877 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H2BMQ99879 126 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 GINS4Q9BRT9 223 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 PRTFDC1Q9NRG1 225 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 VPS29Q9UBQ0 182 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 KIF24Q5T7B8 1368 aa1.16□□□□□ -2.22
PHC3-216ENST00000497171 SCAF11Q99590 1463 aaKnown RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 MDC1Q14676 2089 aaKnown RBP1.16□□□□□ -2.22
PHC3-216ENST00000497171 CR1P17927 2039 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms