RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 IP6K3Q96PC2 410 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 TM2D3Q9BRN9 247 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 PBDC1Q9BVG4 233 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 C16orf95Q9H693 158 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 TMEM138Q9NPI0 162 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 OR5V1Q9UGF6 321 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
SNX13-211ENST00000496855 MYO10Q9HD67 2058 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 SYNJ1O43426 1573 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 RIMS1Q86UR5 1692 aaKnown RBP2.84□□□□□ -1.96
SNX13-211ENST00000496855 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 TRAV41A0A0B4J266 112 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 H3BMM0 161 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 K7ERS5 55 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 NDUFC2O95298 119 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 IGKV2D-28P01615 120 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 GPX2P18283 190 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 PPIBP23284 216 aaKnown RBP2.84□□□□□ -1.96
SNX13-211ENST00000496855 RPS3P23396 243 aaKnown RBP eCLIP2.84□□□□□ -1.96
SNX13-211ENST00000496855 CRABP2P29373 138 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 BLVRBP30043 206 aaPredicted RBP2.84□□□□□ -1.96
SNX13-211ENST00000496855 G6PCP35575 357 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 AKR1C3P42330 323 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 ZNF80P51504 273 aaPredicted RBP2.84□□□□□ -1.96
SNX13-211ENST00000496855 HBA1P69905 142 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 SPCS2Q15005 226 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 OR8J3Q8NGG0 315 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 OR9A2Q8NGT5 310 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 THEM6Q8WUY1 208 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 SKA2Q8WVK7 121 aaPredicted RBP2.84□□□□□ -1.96
SNX13-211ENST00000496855 UBE2WQ96B02 151 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 TCEAL4Q96EI5 215 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 COMMD5Q9GZQ3 224 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 CCDC90BQ9GZT6 254 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 C11orf1Q9H5F2 150 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 ZNF835Q9Y2P0 537 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 U3KQK5 164 aa2.84□□□□□ -1.96
SNX13-211ENST00000496855 CABIN1Q9Y6J0 2220 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 ATG2BQ96BY7 2078 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 TRBV19A0A075B6N1 114 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 VPS37CA5D8V6 355 aaPredicted RBP2.83□□□□□ -1.96
SNX13-211ENST00000496855 DPRXA6NFQ7 191 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 RBP1P09455 135 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 CCL3P10147 92 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 IL1RNP18510 177 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 RPS11P62280 158 aaKnown RBP eCLIP2.83□□□□□ -1.96
SNX13-211ENST00000496855 TBPL1P62380 186 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 FKBP1AP62942 108 aaKnown RBP2.83□□□□□ -1.96
SNX13-211ENST00000496855 ZNF616Q08AN1 781 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 C10orf91Q5T1B1 145 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 GLT8D1Q68CQ7 371 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 ZFP2Q6ZN57 461 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 OR52R1Q8NGF1 315 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 ZC2HC1AQ96GY0 325 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 FOPNLQ96NB1 174 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 NDFIP1Q9BT67 221 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 UPK3BQ9BT76 320 aa2.83□□□□□ -1.96
SNX13-211ENST00000496855 NKX6-2Q9C056 277 aaPredicted RBP2.83□□□□□ -1.96
SNX13-211ENST00000496855 PTPRJQ12913 1337 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 OTOFQ9HC10 1997 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 A0A087WUU8 490 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 C19orf71A6NCJ1 209 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 EFCAB10A6NFE3 127 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 I3L521 148 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 OR2J2O76002 312 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 SRP19P09132 144 aaKnown RBP2.82□□□□□ -1.96
SNX13-211ENST00000496855 ZNF705DP0CH99 300 aaPredicted RBP2.82□□□□□ -1.96
SNX13-211ENST00000496855 IGHV3-30-3P0DP02 117 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 SERPINB10P48595 397 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 PIGPP57054 158 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 SMIM21Q3B7S5 101 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 ZNF561Q8N587 486 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 TMEM105Q8N8V8 129 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 OR5C1Q8NGR4 320 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 ZNF675Q8TD23 568 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 RPS4Y2Q8TD47 263 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 H1FXQ92522 213 aaKnown RBP2.82□□□□□ -1.96
SNX13-211ENST00000496855 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 SPIN2AQ99865 258 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 SPIN2BQ9BPZ2 258 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 EFCAB1Q9HAE3 211 aa2.82□□□□□ -1.96
SNX13-211ENST00000496855 BAZ1BQ9UIG0 1483 aaKnown RBP2.82□□□□□ -1.96
SNX13-211ENST00000496855 HMGXB3Q12766 1538 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 IGKV1D-37A0A075B6S9 117 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 RIIAD1A6NNX1 92 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 E7EQ34 232 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 TRAPPC2LH3BP13 241 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 RPS4Y1P22090 263 aaKnown RBP2.81□□□□□ -1.96
SNX13-211ENST00000496855 TAS2R45P59539 299 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 CDC42P60953 191 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 CKS1BP61024 79 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 EIF4EBP1Q13541 118 aaPredicted RBP2.81□□□□□ -1.96
SNX13-211ENST00000496855 CCDC58Q4VC31 144 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 SSX8Q7RTT4 187 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 TMEM86AQ8N2M4 240 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 RMI2Q96E14 147 aa2.81□□□□□ -1.96
SNX13-211ENST00000496855 CAPZA3Q96KX2 299 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms