RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 OR13G1Q8NGZ3 307 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 ASB13Q8WXK3 278 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 RBMXL1Q96E39 390 aaKnown RBP5.13□□□□□ -1.59
SSBP1-213ENST00000496622 HIST1H2AAQ96QV6 131 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 GINS3Q9BRX5 216 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 TM2D1Q9BX74 207 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 Q9UFV3 132 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 HSPB8Q9UJY1 196 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 GPR132Q9UNW8 380 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 ODAMA1E959 279 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 HAND1O96004 215 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 PMCHP20382 165 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 GABRA2P47869 451 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 ATXN7L3Q14CW9 347 aaPredicted RBP5.13□□□□□ -1.59
SSBP1-213ENST00000496622 KIAA1644Q3SXP7 199 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 SP6Q3SY56 376 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 FAM201AQ5SY85 155 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF324BQ6AW86 544 aaPredicted RBP5.13□□□□□ -1.59
SSBP1-213ENST00000496622 FAM71F2Q6NXP2 309 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 TGIF2LYQ8IUE0 185 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 SAXO1Q8IYX7 474 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 TPRX1Q8N7U7 411 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 SCCPDHQ8NBX0 429 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 OR5H2Q8NGV7 314 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 ABHD5Q8WTS1 349 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 FRZBQ92765 325 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 MOB3AQ96BX8 217 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 SNX22Q96L94 193 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 SMIM3Q9BZL3 60 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 MMP26Q9NRE1 261 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 OSGIN2Q9Y236 505 aa5.13□□□□□ -1.59
SSBP1-213ENST00000496622 NOP16Q9Y3C1 178 aaKnown RBP5.13□□□□□ -1.59
SSBP1-213ENST00000496622 TOX4O94842 621 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 FCGR3AP08637 254 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 WNT2P09544 360 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 SCTP09683 121 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 OR10J1P30954 320 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 PJVKQ0ZLH3 352 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 FOXE3Q13461 319 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 RHEBQ15382 184 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 CDSNQ15517 529 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 EFNB3Q15768 340 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 LY6G6FQ5SQ64 297 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 HOGA1Q86XE5 327 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 OR5AP2Q8NGF4 316 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 OR10G9Q8NGN4 311 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 BLNKQ8WV28 456 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 TMEM230Q96A57 120 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 RCHY1Q96PM5 261 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 RBKSQ9H477 322 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 SLC25A15Q9Y619 301 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 USF3Q68DE3 2245 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 DOPEY2Q9Y3R5 2298 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 C13orf42A0A1B0GVH6 325 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 NPIPB5A8MRT5 1133 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 K7EPK0 472 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 SIRPB1O00241 398 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 TIRAPP58753 221 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 SUPT4H1P63272 117 aaKnown RBP5.12□□□□□ -1.59
SSBP1-213ENST00000496622 SRSF2Q01130 221 aaKnown RBP5.12□□□□□ -1.59
SSBP1-213ENST00000496622 PHLDA2Q53GA4 152 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 IL34Q6ZMJ4 242 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 FAM71E2Q8N5Q1 922 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 OR5A2Q8NGI9 324 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 FAM57AQ8TBR7 257 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 IL1F10Q8WWZ1 152 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 PHYHIPLQ96FC7 376 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 JMJD8Q96S16 334 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 NAA38Q9BRA0 125 aaKnown RBP5.12□□□□□ -1.59
SSBP1-213ENST00000496622 RTBDNQ9BSG5 229 aaPredicted RBP5.12□□□□□ -1.59
SSBP1-213ENST00000496622 DERL1Q9BUN8 251 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 C19orf24Q9BVV8 132 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 FKBP11Q9NYL4 201 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 ANXA10Q9UJ72 324 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 LAMTOR2Q9Y2Q5 125 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 OR51B2Q9Y5P1 312 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 ZFHX3Q15911 3703 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 CELSR2Q9HCU4 2923 aa5.12□□□□□ -1.59
SSBP1-213ENST00000496622 TRAV24A0A0B4J272 114 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 TRGV8A0A0C4DH27 118 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF705FA8MVS1 300 aaPredicted RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 K7EN84 100 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 PRRG2O14669 202 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 PAX4O43316 350 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 TIMM8AO60220 97 aaPredicted RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 PDCD6O75340 191 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF705DP0CH99 300 aaPredicted RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF705BP0CI00 300 aaPredicted RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 FUT3P21217 361 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 FAM78BQ5VT40 261 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 MKXQ8IYA7 352 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 OR1B1Q8NGR6 318 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 MSI2Q96DH6 328 aaKnown RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 OR10C1Q96KK4 312 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 TBX15Q96SF7 602 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 SLC25A21Q9BQT8 299 aaPredicted RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 NDFIP1Q9BT67 221 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF586Q9NXT0 402 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 TMEM213A2RRL7 107 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms