RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 FHITP49789 147 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 RAB5CP51148 216 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 LGALS4P56470 323 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 PAX8Q06710 450 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 Q6ZRG5 221 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 HSD17B13Q7Z5P4 300 aaPredicted RBP13.15□□□□□ -0.31
HLA-A-208ENST00000496081 OR10W1Q8NGF6 305 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 UQCC1Q9NVA1 299 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 POLQO75417 2590 aa13.14□□□□□ -0.31
HLA-A-208ENST00000496081 OOSP1A8MZH6 123 aa13.14□□□□□ -0.31
HLA-A-208ENST00000496081 RAB11AP62491 216 aa13.14□□□□□ -0.31
HLA-A-208ENST00000496081 CLEC12BQ2HXU8 276 aa13.14□□□□□ -0.31
HLA-A-208ENST00000496081 C10orf55Q5SWW7 151 aa13.14□□□□□ -0.31
HLA-A-208ENST00000496081 EIF4E3Q8N5X7 224 aaKnown RBP13.14□□□□□ -0.31
HLA-A-208ENST00000496081 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
HLA-A-208ENST00000496081 SIGLEC9Q9Y336 463 aa13.14□□□□□ -0.31
HLA-A-208ENST00000496081 UMAD1C9J7I0 102 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 IFNA4P05014 189 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 F2RL1P55085 397 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 PRSS8Q16651 343 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 BTNL8Q6UX41 500 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
HLA-A-208ENST00000496081 FBXO7Q9Y3I1 522 aa13.13□□□□□ -0.31
HLA-A-208ENST00000496081 TBL2Q9Y4P3 447 aaKnown RBP13.13□□□□□ -0.31
HLA-A-208ENST00000496081 A0A1B0GW64 132 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 INS-IGF2F8WCM5 200 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 IGKV1D-33P01593 117 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 IGKV1-33P01594 117 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 PRH1P02810 166 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 MDKP21741 143 aaPredicted RBP13.12□□□□□ -0.31
HLA-A-208ENST00000496081 CD24P25063 80 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 CAMLGP49069 296 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 CCDC144NLQ6NUI1 221 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 MMD2Q8IY49 270 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 MARC2Q969Z3 335 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 AJUBAQ96IF1 538 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
HLA-A-208ENST00000496081 CSMD2Q7Z408 3487 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 I3L521 148 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 SLC25A16P16260 332 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 LYPD6BQ8NI32 183 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
HLA-A-208ENST00000496081 MAP1AP78559 2803 aaPredicted RBP13.11□□□□□ -0.31
HLA-A-208ENST00000496081 CENPVL3A0A0U1RRI6 287 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 A0A1W2PN81 502 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 MOSP00540 346 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 RNASE2P10153 161 aaKnown RBP13.11□□□□□ -0.31
HLA-A-208ENST00000496081 CHRNA7P36544 502 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 DLK1P80370 383 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 WT1-ASQ06250 92 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 ZNF616Q08AN1 781 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 HNF4GQ14541 408 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 TUSC1Q2TAM9 212 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 FBLN7Q53RD9 439 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 C2orf83Q53S99 150 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 MALSU1Q96EH3 234 aa13.11□□□□□ -0.31
HLA-A-208ENST00000496081 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
HLA-A-208ENST00000496081 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 MSMBP08118 114 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 SNRNP70P08621 437 aaKnown RBP13.1□□□□□ -0.31
HLA-A-208ENST00000496081 FGF7P21781 194 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 SAA4P35542 130 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 SNCAP37840 140 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 ATP5IP56385 69 aaPredicted RBP13.1□□□□□ -0.31
HLA-A-208ENST00000496081 ERHP84090 104 aaKnown RBP13.1□□□□□ -0.31
HLA-A-208ENST00000496081 MMDQ15546 238 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 TNXAQ16473 311 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 TOR2AQ5JU69 321 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 CENPVQ7Z7K6 275 aaPredicted RBP13.1□□□□□ -0.31
HLA-A-208ENST00000496081 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 TIMM9Q9Y5J7 89 aa13.1□□□□□ -0.31
HLA-A-208ENST00000496081 RAB19A4D1S5 217 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NUDT19A8MXV4 375 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 ACTL6BO94805 426 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 MAS1LP35410 378 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 SERF2P84101 59 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 HES1Q14469 280 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 IL34Q6ZMJ4 242 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NPBQ8NG41 125 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 A0A096LNT2 108 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 FCN1O00602 326 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NPFFO15130 113 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NBR2O15453 112 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NDUFA3O95167 84 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 COMPP49747 757 aaPredicted RBP13.09□□□□□ -0.31
HLA-A-208ENST00000496081 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 NPCDR1Q9BY65 106 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms