RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 KLK9Q9UKQ9 250 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 VPS13DQ5THJ4 4388 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 SCGNO76038 276 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 HPRT1P00492 218 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 NQO2P16083 231 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
SKA1-205ENST00000494518 FGF9P31371 208 aaPredicted RBP9.38□□□□□ -0.91
SKA1-205ENST00000494518 HSPA13P48723 471 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 TAS2R31P59538 309 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 CATR1Q13166 79 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 IDNKQ5T6J7 187 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 UBE2UQ5VVX9 321 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 SLC25A24Q6NUK1 477 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 HOGA1Q86XE5 327 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 SLC38A6Q8IZM9 456 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 SPARTQ8N0X7 666 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 UBAC2Q8NBM4 344 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 C20orf24Q9BUV8 137 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
SKA1-205ENST00000494518 ZNF436Q9C0F3 470 aaPredicted RBP9.38□□□□□ -0.91
SKA1-205ENST00000494518 SSR3Q9UNL2 185 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 NSG2Q9Y328 171 aa9.38□□□□□ -0.91
SKA1-205ENST00000494518 LOC100506127A0A0U1RQW1 187 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 NUPR2A6NF83 97 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 RBFOX2O43251 390 aaKnown RBP eCLIP9.37□□□□□ -0.91
SKA1-205ENST00000494518 PTBP1P26599 531 aaKnown RBP eCLIP9.37□□□□□ -0.91
SKA1-205ENST00000494518 MFAP2P55001 183 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 APOC4P55056 127 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 GABARAPL2P60520 117 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 WT1-ASQ06250 92 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 TPRA1Q86W33 373 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 GDPD1Q8N9F7 314 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 OR5B3Q8NH48 314 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 AIFM2Q9BRQ8 373 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 CHRDL1Q9BU40 450 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 DNAH6Q9C0G6 4158 aa9.37□□□□□ -0.91
SKA1-205ENST00000494518 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 TEX50A0A1B0GTY4 177 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 RLN1P04808 185 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 TRAPPC2P0DI81 140 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 TRAPPC2BP0DI82 140 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 FCGR2BP31994 310 aaPredicted RBP9.36□□□□□ -0.91
SKA1-205ENST00000494518 BMI1P35226 326 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
SKA1-205ENST00000494518 HERV-K104P61576 105 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 TNFRSF9Q07011 255 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 MSMO1Q15800 293 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 ZNF124Q15973 351 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 POU2AF1Q16633 256 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
SKA1-205ENST00000494518 APRG1Q8IVJ8 170 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 RPP25LQ8N5L8 163 aaKnown RBP9.36□□□□□ -0.91
SKA1-205ENST00000494518 ZBTB34Q8NCN2 500 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
SKA1-205ENST00000494518 AUNIPQ9H7T9 357 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 THYN1Q9P016 225 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 HECTD4Q9Y4D8 3996 aa9.36□□□□□ -0.91
SKA1-205ENST00000494518 AGRNO00468 2067 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 TSPAN4O14817 238 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 DEDDO75618 318 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 SERPINE2P07093 398 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
SKA1-205ENST00000494518 TFPI2P48307 235 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 ERVK-16P61578 105 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 Q56UQ5 140 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 LAMTOR1Q6IAA8 161 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 Q6ZWC4 215 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 STPG3Q8N7X2 389 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 PLEKHA2Q9HB19 425 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 DAZ1Q9NQZ3 744 aaKnown RBP9.35□□□□□ -0.91
SKA1-205ENST00000494518 C21orf62Q9NYP8 219 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 EHFQ9NZC4 300 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 RAB26Q9ULW5 256 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 ETV7Q9Y603 341 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 HERC2O95714 4834 aa9.35□□□□□ -0.91
SKA1-205ENST00000494518 MARCH11A6NNE9 402 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 F8W735 103 aaPredicted RBP9.34□□□□□ -0.91
SKA1-205ENST00000494518 CYB5BO43169 146 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 KRASP01116 189 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 GNRHRP30968 328 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 ADMP35318 185 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 G6PCP35575 357 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 LPAR6P43657 344 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 RFX2P48378 723 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 OR5AP2Q8NGF4 316 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 OR1L8Q8NGR8 309 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 SCARB1Q8WTV0 552 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 RNF183Q96D59 192 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 BSCL2Q96G97 398 aaPredicted RBP9.34□□□□□ -0.91
SKA1-205ENST00000494518 SRSF8Q9BRL6 282 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms