RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SRRM4A7MD48 611 aaKnown RBP3.85□□□□□ -1.79
PTCD3-219ENST00000494323 PMS2P5A8MQ11 134 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 SNURFLB1AK76 121 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 OR11H12B2RN74 326 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 PDCD6O75340 191 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 WBP4O75554 376 aaKnown RBP3.85□□□□□ -1.79
PTCD3-219ENST00000494323 CIB2O75838 187 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 RBBP9O75884 186 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 PRH1P02810 166 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 DCKP27707 260 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 HTR2CP28335 458 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 HMGN3Q15651 99 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 GUCA2BQ16661 112 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 TATDN3Q17R31 274 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 RPEL1Q2QD12 228 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 LY6G6FQ5SQ64 297 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 RNLSQ5VYX0 342 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 LCN12Q6JVE5 192 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 DHRS11Q6UWP2 260 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 GGHQ92820 318 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 SMIM19Q96E16 107 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 NEDD4LQ96PU5 975 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 RNF5Q99942 180 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 NICN1Q9BSH3 213 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 HDHD3Q9BSH5 251 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-219ENST00000494323 OR1A1Q9P1Q5 309 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 PSORS1C1Q9UIG5 152 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 SLC22A1O15245 554 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 NAPSAO96009 420 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 IGLV2-23P01705 113 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 HLA-AP01891 365 aaKnown RBP3.84□□□□□ -1.79
PTCD3-219ENST00000494323 SCTP09683 121 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 CD3GP09693 182 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 MYL12AP19105 171 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 CELP19835 753 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 ZBTB25P24278 435 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 LGALS7P47929 136 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 INSL4Q14641 139 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 DEFB114Q30KQ6 69 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 KIAA1644Q3SXP7 199 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 YIF1BQ5BJH7 314 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF343Q6P1L6 599 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 CDH26Q8IXH8 852 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 Q8N402 240 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 RPP25LQ8N5L8 163 aaKnown RBP3.84□□□□□ -1.79
PTCD3-219ENST00000494323 TMEM80Q96HE8 168 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 PGLYRP3Q96LB9 341 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 DERL3Q96Q80 235 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 TSNAXQ99598 290 aaKnown RBP3.84□□□□□ -1.79
PTCD3-219ENST00000494323 OVOL2Q9BRP0 275 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 PLEKHJ1Q9NW61 149 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 SLC2A8Q9NY64 477 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 COA4Q9NYJ1 87 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF221Q9UK13 617 aa3.84□□□□□ -1.79
PTCD3-219ENST00000494323 A0A0A6YYD4 124 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 PPP5D1E7EU14 171 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 H3BUA1 57 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 M0R1X1 148 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 SOCS1O15524 211 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 CRYGBP07316 175 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 AADACP22760 399 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 KIR2DS2P43631 304 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 RPS27AP62979 156 aaKnown RBP3.83□□□□□ -1.8
PTCD3-219ENST00000494323 RHOGP84095 191 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 EWSR1Q01844 656 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ATP5G2Q06055 141 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ST3GAL4Q11206 333 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 UNC119Q13432 240 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 MOGAT2Q3SYC2 334 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 FAM71F2Q6NXP2 309 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF880Q6PDB4 577 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 STHQ8IWL8 128 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 FAM89BQ8N5H3 189 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF485Q8NCK3 441 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF555Q8NEP9 628 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 GATAD1Q8WUU5 269 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 USMG5Q96IX5 58 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 PHB2Q99623 299 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 UQCC2Q9BRT2 126 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 C9orf16Q9BUW7 83 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ST6GALNAC5Q9BVH7 336 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 SLC35D1Q9NTN3 355 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 RDH8Q9NYR8 311 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 SIGLEC8Q9NYZ4 499 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 UBQLN2Q9UHD9 624 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 AK3Q9UIJ7 227 aa3.83□□□□□ -1.8
PTCD3-219ENST00000494323 ELF5Q9UKW6 265 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-219ENST00000494323 DIMT1Q9UNQ2 313 aaKnown RBP3.83□□□□□ -1.8
PTCD3-219ENST00000494323 EXOSC1Q9Y3B2 195 aaKnown RBP3.83□□□□□ -1.8
PTCD3-219ENST00000494323 IGKV1-6A0A0C4DH72 117 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 A0A0J9YWU9 116 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 ITGB1BP1O14713 200 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 AIREO43918 545 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 CLN5O75503 358 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 DEDDO75618 318 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 OR2A4O95047 310 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 IGHV3-23P01764 117 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 APOA2P02652 100 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 FOLR2P14207 255 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 SRMP19623 302 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms