RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 A0A1B0GU03 582 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 SMCO3A2RU48 225 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 G3V3Q6 166 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 RBFOX2O43251 390 aaKnown RBP eCLIP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 OXTP01178 125 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 HOXB5P09067 269 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 SSTR5P35346 364 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 LGALS7P47929 136 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 EFNA4P52798 201 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 LOXL3P58215 753 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 SSBP2P81877 361 aaPredicted RBP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 IL15RAQ13261 267 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 FAM201AQ5SY85 155 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 TMEM268Q5VZI3 342 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 FAM159AQ6UWV7 190 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 ZCCHC24Q8N2G6 241 aaKnown RBP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 LINC00311Q8N616 119 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 FAM216BQ8N7L0 139 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 C8orf46Q8TAG6 207 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 CCDC140Q96MF4 163 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 TP53RKQ96S44 253 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 OR2D2Q9H210 308 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 RPUSD1Q9UJJ7 312 aaKnown RBP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 PRR14LQ5THK1 2151 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 CELSR3Q9NYQ7 3312 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 FXYD6-FXYD2A0A087WZ82 144 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 TRAV39A0A0B4J263 110 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 COLCA2A8K830 154 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 FAM90A26D6RGX4 464 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 DVL1O14640 695 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 MBPP02686 304 aaPredicted RBP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 ESDP10768 282 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 ZNF134P52741 427 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 EIF5AP63241 154 aaKnown RBP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 BSXQ3C1V8 233 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 SFRP2Q96HF1 295 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 SEC22AQ96IW7 307 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 S1PR3Q99500 378 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 ABHD14AQ9BUJ0 271 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 BARX1Q9HBU1 254 aaPredicted RBP5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 AP5S1Q9NUS5 200 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 TNFSF18Q9UNG2 199 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 ASPMQ8IZT6 3477 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 ATMQ13315 3056 aa5.49□□□□□ -1.53
FNDC3B-212ENST00000494000 TRAV14DV4A0A0A6YYC5 116 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 E5RGE8 158 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 TAAR5O14804 337 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 CLDN1O95832 211 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 SOD3P08294 240 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 COL8A2P25067 703 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 IL3RAP26951 378 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 PPP1CCP36873 323 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 THBS3P49746 956 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 RAB5CP51148 216 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 EIF4EBP1Q13541 118 aaPredicted RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 GNMTQ14749 295 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 DNLZQ5SXM8 178 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 ALKAL2Q6UX46 152 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 IL17RELQ6ZVW7 336 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 KCNRGQ8N5I3 272 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 FAM71E2Q8N5Q1 922 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 TPRX1Q8N7U7 411 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 SLC35G3Q8N808 338 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 AGMATQ9BSE5 352 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 DCTN5Q9BTE1 182 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 NSG2Q9Y328 171 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 RAI1Q7Z5J4 1906 aaPredicted RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 CADP27708 2225 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 KANTRA0A1W2PQU2 76 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 AP4M1O00189 453 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 CYB5BO43169 146 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 ZNF205O95201 554 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 IGLV2-14P01704 120 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 SP6Q3SY56 376 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 LEMD1Q68G75 181 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 SLC25A48Q6ZT89 311 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 TMUB2Q71RG4 321 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 MRPL41Q8IXM3 137 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 LINC01561Q8N1V8 128 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 OR51H1Q8NH63 302 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 RFESDQ8TAC1 157 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 H1FXQ92522 213 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 FLYWCH2Q96CP2 140 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 OR10C1Q96KK4 312 aa5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 PATZ1Q9HBE1 687 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.48□□□□□ -1.53
FNDC3B-212ENST00000494000 COL6A6A6NMZ7 2263 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 C17orf98A8MV24 154 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 A8MWP6 167 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 C19orf84I3L1E1 186 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 K7EP13 123 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 OVOL3O00110 214 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 GNG7O60262 68 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 DEDDO75618 318 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 HPRT1P00492 218 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 TFF1P04155 84 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 GPR6P46095 362 aaPredicted RBP5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 PEA15Q15121 130 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 NMSQ5H8A3 153 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms