RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 KLF12Q9Y4X4 402 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 LTN1O94822 1766 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 ATP5L2Q7Z4Y8 100 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 CHCHD1Q96BP2 118 aaKnown RBP6.67□□□□□ -1.34
BRCA1-221ENST00000493795 GPHA2Q96T91 129 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 NPDC1Q9NQX5 325 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-221ENST00000493795 HS3ST3B1Q9Y662 390 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 CHD2O14647 1828 aaKnown RBP6.66□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV1-45A0A0A0MS14 117 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 IGKV1D-33P01593 117 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 IGKV1-33P01594 117 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 LINC01559Q495D7 138 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 FHL5Q5TD97 284 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 PLEKHB2Q96CS7 222 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 PRADC1Q9BSG0 188 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 MYOM1P52179 1685 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 A0A1W2PRX2 142 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 ADMP35318 185 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 TFF3Q07654 80 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 C9orf50Q5SZB4 431 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 RFLNBQ8N5W9 214 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 S4R3C0 116 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 TIAM2Q8IVF5 1701 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3-64A0A075B6Q5 118 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 RPL39P5Q59GN2 51 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 OR13A1Q8NGR1 328 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 FBXL15Q9H469 300 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 WBP1LQ9NX94 342 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 SRP19P09132 144 aaKnown RBP6.66□□□□□ -1.34
BRCA1-221ENST00000493795 GZMBP10144 247 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 IGFBP6P24592 240 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-221ENST00000493795 ATP5G3P48201 142 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 RASL10AQ92737 203 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF703Q9H7S9 590 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-221ENST00000493795 DPM3Q9P2X0 92 aa6.66□□□□□ -1.34
BRCA1-221ENST00000493795 ARID1BQ8NFD5 2236 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-221ENST00000493795 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 TM4SF5O14894 197 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 CCL1P22362 96 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 SUMO4Q6EEV6 95 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 FGF11Q92914 225 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 DRD3P35462 400 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 VDAC2P45880 294 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-221ENST00000493795 NPC2P61916 151 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 CD300EQ496F6 205 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-221ENST00000493795 MIR17HGQ75NE6 70 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 GTSCR1Q86UQ5 136 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 KCNK17Q96T54 332 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 PIK3C2AO00443 1686 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 H2BFSP57053 126 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 GAGE2AQ6NT46 116 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 CACNG8Q8WXS5 425 aa6.65□□□□□ -1.34
BRCA1-221ENST00000493795 GTF3AQ92664 365 aaKnown RBP6.65□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF708P17019 499 aa6.65□□□□□ -1.35
BRCA1-221ENST00000493795 TGIF1Q15583 401 aa6.65□□□□□ -1.35
BRCA1-221ENST00000493795 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.35
BRCA1-221ENST00000493795 LEPROTO15243 131 aa6.65□□□□□ -1.35
BRCA1-221ENST00000493795 MAJINQ3KP22 176 aa6.65□□□□□ -1.35
BRCA1-221ENST00000493795 PILRBQ9UKJ0 227 aa6.65□□□□□ -1.35
BRCA1-221ENST00000493795 PSCAO43653 123 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 ESDP10768 282 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 CT83Q5H943 113 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 MRPL52Q86TS9 123 aaKnown RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 DTX4Q9Y2E6 619 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 J3QW42 95 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 EFEMP2O95967 443 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 IGKV1D-16P01601 117 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 LAGE3Q14657 143 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 PVRIGQ6DKI7 326 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 GLMPQ8WWB7 406 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 OR5P3Q8WZ94 311 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 A0A087WX48 190 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 APOBEC3AP31941 199 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 RIPPLY2Q5TAB7 128 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 DLX4Q92988 240 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 SLC25A38Q96DW6 304 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 RSPO3Q9BXY4 272 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 FOXD3Q9UJU5 478 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 FMN2Q9NZ56 1722 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 IFT172Q9UG01 1749 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 F2Z2F3 143 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 EVI2AP22794 236 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 PCOLCEQ15113 449 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
BRCA1-221ENST00000493795 RPP25Q9BUL9 199 aaKnown RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 DUSP15Q9H1R2 295 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-221ENST00000493795 IGLV1-36A0A0B4J1U3 117 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 MON2Q7Z3U7 1717 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 H3BMM0 161 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 UBE2WQ96B02 151 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 YBX2Q9Y2T7 364 aaKnown RBP6.63□□□□□ -1.35
BRCA1-221ENST00000493795 MYO18AQ92614 2054 aaKnown RBP6.63□□□□□ -1.35
BRCA1-221ENST00000493795 CMC4P56277 68 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-221ENST00000493795 GNG5P63218 68 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 CCL20P78556 96 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 C1orf122Q6ZSJ8 110 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 NEU4Q8WWR8 484 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms