RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 IGHV4-30-4P0DP06 118 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-214ENST00000493608 F2RP25116 425 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 G6PCP35575 357 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 POU2AF1Q16633 256 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 ZNF585BQ52M93 769 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 MZT2AQ6P582 158 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 CMTM1Q8IZ96 169 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 BORCS5Q969J3 196 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 DGCR14Q96DF8 476 aaKnown RBP8.09□□□□□ -1.11
COL6A3-214ENST00000493608 CCDC140Q96MF4 163 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 HINT2Q9BX68 163 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 COMMD5Q9GZQ3 224 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 SCPEP1Q9HB40 452 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 COMMD9Q9P000 198 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 KLK11Q9UBX7 282 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 IGHV3-21A0A0B4J1V1 117 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 IGLC7A0M8Q6 106 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 MFSD2BA6NFX1 497 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 MARCH11A6NNE9 402 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 H0Y980 276 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 GGCTO75223 188 aaKnown RBP8.08□□□□□ -1.12
COL6A3-214ENST00000493608 DHFRP00374 187 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 TRAPPC2P0DI81 140 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 TRAPPC2BP0DI82 140 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 RCVRNP35243 200 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 ARL3P36405 182 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 ERVK-16P61578 105 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 GPR141Q7Z602 305 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 TBC1D26Q86UD7 250 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 OR52I2Q8NH67 350 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 EEF1AKMT3Q96AZ1 226 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 ABHD1Q96SE0 405 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 QTRT1Q9BXR0 403 aaKnown RBP8.08□□□□□ -1.12
COL6A3-214ENST00000493608 MRPS26Q9BYN8 205 aaKnown RBP8.08□□□□□ -1.12
COL6A3-214ENST00000493608 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 PEMTQ9UBM1 199 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 EXTL2Q9UBQ6 330 aa8.08□□□□□ -1.12
COL6A3-214ENST00000493608 IGLV11-55A0A075B6I3 123 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 IGHV3-35A0A0C4DH35 117 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 ZNF320A2RRD8 509 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 CLEC3BP05452 202 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 OR13C7P0DN81 318 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 HIST1H1BP16401 226 aaKnown RBP8.07□□□□□ -1.12
COL6A3-214ENST00000493608 ALDH3B2P48448 385 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 MECP2P51608 486 aaKnown RBP8.07□□□□□ -1.12
COL6A3-214ENST00000493608 SPCS2Q15005 226 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 CD300EQ496F6 205 aaPredicted RBP8.07□□□□□ -1.12
COL6A3-214ENST00000493608 SLC25A24Q6NUK1 477 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 CACNG8Q8WXS5 425 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 AP3S1Q92572 193 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 RCHY1Q96PM5 261 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 SIGLEC8Q9NYZ4 499 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 OR51B2Q9Y5P1 312 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 HUWE1Q7Z6Z7 4374 aaKnown RBP8.07□□□□□ -1.12
COL6A3-214ENST00000493608 TENM3Q9P273 2699 aa8.07□□□□□ -1.12
COL6A3-214ENST00000493608 C2orf70A6NJV1 201 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 ZNF785A8K8V0 405 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 H3BS24 57 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 CTDSP2O14595 271 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 RGS5O15539 181 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 SNAPC5O75971 98 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 IGKV1-39P01597 117 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 CD3DP04234 171 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 IGKV1D-39P04432 117 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 IFNA6P05013 189 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 SERPINE2P07093 398 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 FOLR2P14207 255 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 PGAM2P15259 253 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 PI3P19957 117 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 GPR183P32249 361 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 WT1-ASQ06250 92 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 KLK9Q2XQG4 91 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 DEFB114Q30KQ6 69 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 LCN12Q6JVE5 192 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 LPCAT3Q6P1A2 487 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 GPHB5Q86YW7 130 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 CLVS1Q8IUQ0 354 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-214ENST00000493608 SGPP2Q8IWX5 399 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 Q8N402 240 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 DYNLRB2Q8TF09 96 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 THAP7Q9BT49 309 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-214ENST00000493608 MIXL1Q9H2W2 232 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 NDUFA4L2Q9NRX3 87 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 KLK9Q9UKQ9 250 aa8.06□□□□□ -1.12
COL6A3-214ENST00000493608 STAB2Q8WWQ8 2551 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 TRBV7-1A0A0A6YYK4 115 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 S100GP29377 79 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 MFAP2P55001 183 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 UCP3P55916 312 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 GUCA2BQ16661 112 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 IZUMO4Q1ZYL8 232 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 FAM106AQ4KMX7 169 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 TM4SF20Q53R12 229 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 RNASE10Q5GAN6 216 aaKnown RBP8.05□□□□□ -1.12
COL6A3-214ENST00000493608 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 LAX1Q8IWV1 398 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 SLC38A6Q8IZM9 456 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 GDPD1Q8N9F7 314 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms