RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 ZNF429Q86V71 674 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 OR1L8Q8NGR8 309 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 FAM110DQ8TAY7 271 aaPredicted RBP10.59□□□□□ -0.71
MSH6-208ENST00000493177 SRSF12Q8WXF0 261 aaKnown RBP10.59□□□□□ -0.71
MSH6-208ENST00000493177 FAM103A1Q9BTL3 118 aaKnown RBP10.59□□□□□ -0.71
MSH6-208ENST00000493177 ENY2Q9NPA8 101 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 TMEM14BQ9NUH8 114 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 WRBO00258 174 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 KCNAB3O43448 404 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 PITX3O75364 302 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 APELAP0DMC3 54 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 NKX2-1P43699 371 aaPredicted RBP10.58□□□□□ -0.72
MSH6-208ENST00000493177 HOXA1P49639 335 aaPredicted RBP10.58□□□□□ -0.72
MSH6-208ENST00000493177 H2BFSP57053 126 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 S100A10P60903 97 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 CYCSP99999 105 aaKnown RBP10.58□□□□□ -0.72
MSH6-208ENST00000493177 NDPQ00604 133 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
MSH6-208ENST00000493177 Q6ZS46 218 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 OR5B3Q8NH48 314 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
MSH6-208ENST00000493177 MAGT1Q9H0U3 335 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 ZNF702PQ9H963 129 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 ZNF257Q9Y2Q1 563 aa10.58□□□□□ -0.72
MSH6-208ENST00000493177 LSM5Q9Y4Y9 91 aaKnown RBP10.58□□□□□ -0.72
MSH6-208ENST00000493177 MSGN1A6NI15 193 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 LINC01548A6NM66 108 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 ATP6V0E1O15342 81 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 FBXO24O75426 580 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 MED6O75586 246 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 TSPAN15O95858 294 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 BCAP31P51572 246 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 SPCS3P61009 180 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 SSBP2P81877 361 aaPredicted RBP10.57□□□□□ -0.72
MSH6-208ENST00000493177 PRCDQ00LT1 54 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 CD83Q01151 205 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 NMES1Q9C002 83 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 RBKSQ9H477 322 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
MSH6-208ENST00000493177 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 A0A1W2PN81 502 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 FAM90A26D6RGX4 464 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 E7EUB6 86 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 IGHG2P01859 326 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 CHRNA7P36544 502 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 POLR2GP62487 172 aaKnown RBP eCLIP10.56□□□□□ -0.72
MSH6-208ENST00000493177 NSUN5P1Q3KNT7 163 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 TMEM95Q3KNT9 176 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 MRPL41Q8IXM3 137 aaKnown RBP10.56□□□□□ -0.72
MSH6-208ENST00000493177 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
MSH6-208ENST00000493177 NDUFA4L2Q9NRX3 87 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 HSPB7Q9UBY9 170 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 LINC00527Q9UJ94 153 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 RCL1Q9Y2P8 373 aaKnown RBP10.56□□□□□ -0.72
MSH6-208ENST00000493177 FBXO7Q9Y3I1 522 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 WSB1Q9Y6I7 421 aa10.56□□□□□ -0.72
MSH6-208ENST00000493177 AP4M1O00189 453 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 SYNGR2O43760 224 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 SSSCA1O60232 199 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 MBPP02686 304 aaPredicted RBP10.55□□□□□ -0.72
MSH6-208ENST00000493177 GIPP09681 153 aaPredicted RBP10.55□□□□□ -0.72
MSH6-208ENST00000493177 IAPPP10997 89 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 ID3Q02535 119 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 TMEM267Q0VDI3 215 aaPredicted RBP10.55□□□□□ -0.72
MSH6-208ENST00000493177 RAB32Q13637 225 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 AARDQ4LEZ3 155 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 HIST2H2BDQ6DRA6 164 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 UNQ5815/PRO19632Q6UWF5 114 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 LFNGQ8NES3 379 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 OR10W1Q8NGF6 305 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 DTD1Q8TEA8 209 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 CHAC2Q8WUX2 184 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 HIPK2Q9H2X6 1198 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 HEYLQ9NQ87 328 aaPredicted RBP10.55□□□□□ -0.72
MSH6-208ENST00000493177 ZFP57Q9NU63 452 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 SERTAD4Q9NUC0 356 aa10.55□□□□□ -0.72
MSH6-208ENST00000493177 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 A0A1B0GW64 132 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 TEX22C9J3V5 150 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 K7EPK0 472 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 L7N2F9 121 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 CCNKO75909 580 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 RLN2P04090 185 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 REG1AP05451 166 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 OR13C7P0DN81 318 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 EGR2P11161 476 aaPredicted RBP10.54□□□□□ -0.72
MSH6-208ENST00000493177 RAP2BP61225 183 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 VAMP2P63027 116 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 ERHP84090 104 aaKnown RBP10.54□□□□□ -0.72
MSH6-208ENST00000493177 CENPVQ7Z7K6 275 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms