RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TNCP24821 2201 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 SNAPC5O75971 98 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 KRASP01116 189 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 HLA-AP01891 365 aaKnown RBP8.69□□□□□ -1.02
LRTM1-202ENST00000493075 REG1AP05451 166 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 SERPINE2P07093 398 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 SNX29P2Q8IUI4 249 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 GDPD1Q8N9F7 314 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 ZNF502Q8TBZ5 544 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 C15orf40Q8WUR7 153 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 ATP6V0BQ99437 205 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 TSC22D3Q99576 134 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 TUBA4BQ9H853 241 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 ZC4H2Q9NQZ6 224 aa8.69□□□□□ -1.02
LRTM1-202ENST00000493075 MFSD2BA6NFX1 497 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 A8MWP6 167 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 IGHV3-23P01764 117 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 SMIM18P0DKX4 95 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 OR13C7P0DN81 318 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 RPA2P15927 270 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 CBLN1P23435 193 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 SLC38A6Q8IZM9 456 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 OR10W1Q8NGF6 305 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 OR5B3Q8NH48 314 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 DYNLRB2Q8TF09 96 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 LSM10Q969L4 123 aaKnown RBP8.68□□□□□ -1.02
LRTM1-202ENST00000493075 NAA50Q9GZZ1 169 aaKnown RBP8.68□□□□□ -1.02
LRTM1-202ENST00000493075 SLC2A8Q9NY64 477 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 PRNDQ9UKY0 176 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 OR51B2Q9Y5P1 312 aa8.68□□□□□ -1.02
LRTM1-202ENST00000493075 KMT2CQ8NEZ4 4911 aaKnown RBP8.68□□□□□ -1.02
LRTM1-202ENST00000493075 ZNF320A2RRD8 509 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 FAM25AB3EWG3 89 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 FAM25CB3EWG5 89 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 FAM25GB3EWG6 89 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 C8orf88P0DMB2 117 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 TBPP20226 339 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 G6PCP35575 357 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 ELLP55199 621 aaPredicted RBP8.67□□□□□ -1.02
LRTM1-202ENST00000493075 HAGHQ16775 308 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 PHLDA2Q53GA4 152 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 GPR107Q5VW38 600 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 SLC25A24Q6NUK1 477 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 LINC00322Q6ZN03 302 aaPredicted RBP8.67□□□□□ -1.02
LRTM1-202ENST00000493075 TBC1D26Q86UD7 250 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 MUC7Q8TAX7 377 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 MARC2Q969Z3 335 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 ZNF486Q96H40 463 aaPredicted RBP8.67□□□□□ -1.02
LRTM1-202ENST00000493075 TMEM56Q96MV1 263 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 NEURL2Q9BR09 285 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 SPATA25Q9BR10 227 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 PALMDQ9NP74 551 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 TMEM14BQ9NUH8 114 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 F11RQ9Y624 299 aaKnown RBP8.67□□□□□ -1.02
LRTM1-202ENST00000493075 S4R3C0 116 aa8.67□□□□□ -1.02
LRTM1-202ENST00000493075 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
LRTM1-202ENST00000493075 IFNA6P05013 189 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 ALDH3B2P48448 385 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 RND3P61587 244 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 ZNF57Q68EA5 555 aaPredicted RBP8.66□□□□□ -1.02
LRTM1-202ENST00000493075 PLET1Q6UQ28 207 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 LHFPL1Q86WI0 220 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 ARRDC1Q8N5I2 433 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 UXS1Q8NBZ7 420 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 SEC22AQ96IW7 307 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 MRPS26Q9BYN8 205 aaKnown RBP8.66□□□□□ -1.02
LRTM1-202ENST00000493075 ZNF436Q9C0F3 470 aaPredicted RBP8.66□□□□□ -1.02
LRTM1-202ENST00000493075 MRPL27Q9P0M9 148 aaKnown RBP8.66□□□□□ -1.02
LRTM1-202ENST00000493075 KLK11Q9UBX7 282 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 MTFP1Q9UDX5 166 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 NSG2Q9Y328 171 aa8.66□□□□□ -1.02
LRTM1-202ENST00000493075 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 C15orf61A6NNL5 157 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 TGOLN2O43493 480 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 GPR183P32249 361 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 CD81P60033 236 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 GUCA2BQ16661 112 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 RNASE10Q5GAN6 216 aaKnown RBP8.65□□□□□ -1.02
LRTM1-202ENST00000493075 SPSB3Q6PJ21 355 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 H2BFWTQ7Z2G1 175 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 OR52I2Q8NH67 350 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 BSCL2Q96G97 398 aaPredicted RBP8.65□□□□□ -1.02
LRTM1-202ENST00000493075 ABHD1Q96SE0 405 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 EXTL2Q9UBQ6 330 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 UFC1Q9Y3C8 167 aa8.65□□□□□ -1.02
LRTM1-202ENST00000493075 M0QYG6 137 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 IGKV1-39P01597 117 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 CD3DP04234 171 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 IGKV1D-39P04432 117 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 CD7P09564 240 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 EDN2P20800 178 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 MFAP2P55001 183 aa8.64□□□□□ -1.03
LRTM1-202ENST00000493075 HSPE1P61604 102 aaKnown RBP8.64□□□□□ -1.03
LRTM1-202ENST00000493075 MRPS10P82664 201 aaKnown RBP8.64□□□□□ -1.03
LRTM1-202ENST00000493075 SSBP1Q04837 148 aaKnown RBP8.64□□□□□ -1.03
LRTM1-202ENST00000493075 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms