RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 A0A1B0GV50 99 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 RBFOX3A6NFN3 312 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 C9JQL5 133 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 PRB1P04280 392 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 CEACAM3P40198 252 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 ELLP55199 621 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 ERHP84090 104 aaKnown RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 BSXQ3C1V8 233 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 TPTE2P1Q5T6R2 138 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 ZNF430Q9H8G1 570 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 NPVFQ9HCQ7 196 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 SLC25A17O43808 307 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 OPN1MWP04001 364 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 OPN1MW2P0DN77 364 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 OPN1MW3P0DN78 364 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 ZFP36P26651 326 aaKnown RBP11.32□□□□□ -0.6
PTPN7-216ENST00000492977 PDLIM4P50479 330 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 ACSM6Q6P461 480 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 ZNF843Q8N446 348 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 RITA1Q96K30 269 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 SIRT7Q9NRC8 400 aa11.32□□□□□ -0.6
PTPN7-216ENST00000492977 A0A1W2PPI3 338 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 ODF3BA8MYP8 253 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 EREGO14944 169 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 CRYGBP07316 175 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 MAS1LP35410 378 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 OPRK1P41145 380 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 PPT1P50897 306 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-216ENST00000492977 HCP5Q6MZN7 132 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 ATRAIDQ6UW56 229 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 MMD2Q8IY49 270 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 RPP25LQ8N5L8 163 aaKnown RBP11.31□□□□□ -0.6
PTPN7-216ENST00000492977 OR10G4Q8NGN3 311 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 OR10G7Q8NGN6 311 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 NKX6-2Q9C056 277 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-216ENST00000492977 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 SLC39A9Q9NUM3 307 aa11.31□□□□□ -0.6
PTPN7-216ENST00000492977 USP24Q9UPU5 2620 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 LRBAP50851 2863 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 SNAPINO95295 136 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
PTPN7-216ENST00000492977 LMO4P61968 165 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 PAX2Q02962 417 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 RAB31Q13636 194 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 PMS2P11Q13670 270 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 PSG5Q15238 335 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 ZNF506Q5JVG8 444 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
PTPN7-216ENST00000492977 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 CLDND2Q8NHS1 167 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 CCL19Q99731 98 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 RARRES2Q99969 163 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-216ENST00000492977 BPESC1Q9GZL8 116 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 KCNIP2Q9NS61 270 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
PTPN7-216ENST00000492977 ARHGAP32A7KAX9 2087 aa11.3□□□□□ -0.6
PTPN7-216ENST00000492977 IGHV2-70DA0A0C4DH43 119 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 CTXND1A0A1B0GTU2 59 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 CYB5BO43169 146 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 RNF224P0DH78 156 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.65e-7■■■■■ 33
PTPN7-216ENST00000492977 BTN1A1Q13410 526 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 HNF4GQ14541 408 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 PRSS8Q16651 343 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 KHDC3LQ587J8 217 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 LCN15Q6UWW0 184 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 VMO1Q7Z5L0 202 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
PTPN7-216ENST00000492977 CGB1A6NKQ9 187 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 E7EUB6 86 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 HSPB1P04792 205 aaKnown RBP11.28□□□□□ -0.6
PTPN7-216ENST00000492977 LCN2P80188 198 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 HABP2Q14520 560 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-216ENST00000492977 HAGHQ16775 308 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 LDLRAD2Q5SZI1 272 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 MINOS1Q5TGZ0 78 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 SSX7Q7RTT5 188 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 CACNG8Q8WXS5 425 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 MGST2Q99735 147 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms