RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 ZNF546Q86UE3 836 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 GRPEL2Q8TAA5 225 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 SRSF12Q8WXF0 261 aaKnown RBP17.5■□□□□ 0.39
PSPC1-204ENST00000492741 CIB3Q96Q77 187 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-204ENST00000492741 HIVEP1P15822 2718 aa17.49■□□□□ 0.39
PSPC1-204ENST00000492741 SLC25A4P12235 298 aa17.49■□□□□ 0.39
PSPC1-204ENST00000492741 RPL23AP62750 156 aaKnown RBP17.49■□□□□ 0.39
PSPC1-204ENST00000492741 NOXA1Q86UR1 476 aa17.49■□□□□ 0.39
PSPC1-204ENST00000492741 OR11H4Q8NGC9 324 aa17.49■□□□□ 0.39
PSPC1-204ENST00000492741 ZNF418Q8TF45 676 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-204ENST00000492741 HYLS1Q96M11 299 aa17.49■□□□□ 0.39
PSPC1-204ENST00000492741 PSENENQ9NZ42 101 aa17.49■□□□□ 0.39
PSPC1-204ENST00000492741 A0A1W2PN81 502 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 BOLA2-SMG1P6H3BVE0 249 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 GPR137BO60478 399 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 CHRNA7P36544 502 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 TUSC1Q2TAM9 212 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 OR10W1Q8NGF6 305 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 ARPC1AQ92747 370 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 TNCP24821 2201 aa17.48■□□□□ 0.39
PSPC1-204ENST00000492741 IGHV7-81A0A0B4J1V7 117 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 MSGN1A6NI15 193 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 APELAP0DMC3 54 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 NUP62P37198 522 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 CAV2P51636 162 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 TMEM86BQ8N661 226 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 PPP1R14BQ96C90 147 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 HSPB9Q9BQS6 159 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 PAIP2BQ9ULR5 123 aaKnown RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 TET2Q6N021 2002 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 MXRA5Q9NR99 2828 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 H3BP45 60 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 KCNAB3O43448 404 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 AMY1AP04745 511 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 SSBP2P81877 361 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 ERHP84090 104 aaKnown RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 SPANXN5Q5MJ07 72 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 MRPL41Q8IXM3 137 aaKnown RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 INO80EQ8NBZ0 244 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 SMIM8Q96KF7 97 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 FAM103A1Q9BTL3 118 aaKnown RBP17.47■□□□□ 0.39
PSPC1-204ENST00000492741 WSB1Q9Y6I7 421 aa17.47■□□□□ 0.39
PSPC1-204ENST00000492741 CGB1A6NKQ9 187 aa17.46■□□□□ 0.39
PSPC1-204ENST00000492741 ARPC5O15511 151 aa17.46■□□□□ 0.39
PSPC1-204ENST00000492741 LYL1P12980 280 aa17.46■□□□□ 0.39
PSPC1-204ENST00000492741 ZC4H2Q9NQZ6 224 aa17.46■□□□□ 0.39
PSPC1-204ENST00000492741 PARP11Q9NR21 331 aa17.46■□□□□ 0.39
PSPC1-204ENST00000492741 DNAJC9-AS1A6NH13 148 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 PLXNB1O43157 2135 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 LY86O95711 162 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 TMEM50AO95807 157 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 IFNA10P01566 189 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 VDAC2P45880 294 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-204ENST00000492741 P2RY1P47900 373 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 NKX2-5P52952 324 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-204ENST00000492741 PAX9P55771 341 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 TAS2R30P59541 319 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 BLCAPP62952 87 aa17.45■□□□□ 0.38
PSPC1-204ENST00000492741 RPP30P78346 268 aaKnown RBP17.45■□□□□ 0.38
PSPC1-204ENST00000492741 A0A1B0GW64 132 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 OR13C7P0DN81 318 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 SNCAP37840 140 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 EIF2B2P49770 351 aaKnown RBP17.44■□□□□ 0.38
PSPC1-204ENST00000492741 AP2S1P53680 142 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-204ENST00000492741 TMEM65Q6PI78 240 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 OR2C3Q8N628 320 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 C11orf1Q9H5F2 150 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 FAM24AA6NFZ4 105 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 NDPQ00604 133 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 LYRM2Q9NU23 88 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-204ENST00000492741 STRAPQ9Y3F4 350 aaKnown RBP17.44■□□□□ 0.38
PSPC1-204ENST00000492741 U3KQ87 197 aa17.44■□□□□ 0.38
PSPC1-204ENST00000492741 HMSDA8MTL9 139 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 TEX22C9J3V5 150 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 CRLF1O75462 422 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 REG1AP05451 166 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 FAM157CP0CG43 387 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 RPL12P30050 165 aaKnown RBP17.43■□□□□ 0.38
PSPC1-204ENST00000492741 NPFFR1Q9GZQ6 430 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 MFFQ9GZY8 342 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 SLC25A31Q9H0C2 315 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 TNFSF18Q9UNG2 199 aa17.43■□□□□ 0.38
PSPC1-204ENST00000492741 TSC22D2O75157 780 aa17.42■□□□□ 0.38
PSPC1-204ENST00000492741 WT1-ASQ06250 92 aa17.42■□□□□ 0.38
PSPC1-204ENST00000492741 ARSJQ5FYB0 599 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-204ENST00000492741 HSD17B13Q7Z5P4 300 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-204ENST00000492741 SLC35E3Q7Z769 313 aa17.42■□□□□ 0.38
PSPC1-204ENST00000492741 ESM1Q9NQ30 184 aa17.42■□□□□ 0.38
PSPC1-204ENST00000492741 IGLC7A0M8Q6 106 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 LINC01548A6NM66 108 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 TRIM77I1YAP6 450 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 ATP6V0E1O15342 81 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 AREGP15514 252 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 HTR2BP41595 481 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 LFNGQ8NES3 379 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 SLC24A4Q8NFF2 622 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 SRSF8Q9BRL6 282 aaKnown RBP17.41■□□□□ 0.38
PSPC1-204ENST00000492741 TMEM267Q0VDI3 215 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-204ENST00000492741 ACOT7LQ6ZUV0 252 aa17.41■□□□□ 0.38
PSPC1-204ENST00000492741 TMEM252Q8N6L7 170 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms