RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 A0A087WXM4 84 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 TEX50A0A1B0GTY4 177 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 MARCH11A6NNE9 402 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 A8MWP6 167 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 PGLYRP1O75594 196 aaPredicted RBP12.97□□□□□ -0.33
SGMS1-204ENST00000492601 TRAPPC2P0DI81 140 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 TRAPPC2BP0DI82 140 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 F2RP25116 425 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 PRSS3P35030 304 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 LPAR6P43657 344 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 TAS2R46P59540 309 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 UNQ9165/PRO28630Q6UXU0 137 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 ZNF502Q8TBZ5 544 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 HINT2Q9BX68 163 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 FXYD6Q9H0Q3 95 aa12.97□□□□□ -0.33
SGMS1-204ENST00000492601 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
SGMS1-204ENST00000492601 EIF4EP06730 217 aaKnown RBP12.96□□□□□ -0.33
SGMS1-204ENST00000492601 OR13C7P0DN81 318 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 NAT1P18440 290 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 HLA-DMAP28067 261 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 HRH1P35367 487 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 BTNL8Q6UX41 500 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 GDPD1Q8N9F7 314 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 FCAMRQ8WWV6 532 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 SLC25A46Q96AG3 418 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.33
SGMS1-204ENST00000492601 SRSF8Q9BRL6 282 aaKnown RBP12.96□□□□□ -0.33
SGMS1-204ENST00000492601 THYN1Q9P016 225 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 COMMD3Q9UBI1 195 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 NSG2Q9Y328 171 aa12.96□□□□□ -0.33
SGMS1-204ENST00000492601 IGHV3-21A0A0B4J1V1 117 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 LCE6AA0A183 80 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 TNFAIP8O95379 198 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 KRASP01116 189 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 SERPINE2P07093 398 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 PTBP1P26599 531 aaKnown RBP eCLIP12.95□□□□□ -0.341e-16■■■■■ 27.9
SGMS1-204ENST00000492601 G6PCP35575 357 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 WT1-ASQ06250 92 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 ZNF585BQ52M93 769 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 SLC25A24Q6NUK1 477 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 PLET1Q6UQ28 207 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 SLC16A13Q7RTY0 426 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 CMTM1Q8IZ96 169 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 OR1L8Q8NGR8 309 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
SGMS1-204ENST00000492601 PLECQ15149 4684 aaKnown RBP12.95□□□□□ -0.34
SGMS1-204ENST00000492601 OR2T8A6NH00 312 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 GPR31O00270 319 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 FGF2P09038 288 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 NCS1P62166 190 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 PHLDA2Q53GA4 152 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
SGMS1-204ENST00000492601 NDUFA4L2Q9NRX3 87 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
SGMS1-204ENST00000492601 CYB5BO43169 146 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 TGOLN2O43493 480 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 SNAPC5O75971 98 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 MFAP2P55001 183 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 VBP1P61758 197 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 TSPAN5P62079 268 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 HSD17B13Q7Z5P4 300 aaPredicted RBP12.93□□□□□ -0.34
SGMS1-204ENST00000492601 SNX29P2Q8IUI4 249 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 VN1R17PQ8TDU5 208 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 GPX8Q8TED1 209 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 FUNDC2Q9BWH2 189 aa12.93□□□□□ -0.34
SGMS1-204ENST00000492601 SMIM31A0A1B0GVY4 71 aa12.92□□□□□ -0.34
SGMS1-204ENST00000492601 C8orf88P0DMB2 117 aa12.92□□□□□ -0.34
SGMS1-204ENST00000492601 RBPMS2Q6ZRY4 209 aaKnown RBP12.92□□□□□ -0.34
SGMS1-204ENST00000492601 LSM10Q969L4 123 aaKnown RBP12.92□□□□□ -0.34
SGMS1-204ENST00000492601 MARC2Q969Z3 335 aa12.92□□□□□ -0.34
SGMS1-204ENST00000492601 ZNF436Q9C0F3 470 aaPredicted RBP12.92□□□□□ -0.34
SGMS1-204ENST00000492601 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
SGMS1-204ENST00000492601 UFC1Q9Y3C8 167 aa12.92□□□□□ -0.34
SGMS1-204ENST00000492601 F11RQ9Y624 299 aaKnown RBP12.92□□□□□ -0.34
SGMS1-204ENST00000492601 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
SGMS1-204ENST00000492601 APOA1P02647 267 aa12.91□□□□□ -0.34
SGMS1-204ENST00000492601 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-204ENST00000492601 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
SGMS1-204ENST00000492601 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
SGMS1-204ENST00000492601 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 HPGDSO60760 199 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 ELK1P19419 428 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 ANKRD55Q3KP44 614 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 TBC1D26Q86UD7 250 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 UBAC2Q8NBM4 344 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 OR1L6Q8NGR2 347 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 SCARB1Q8WTV0 552 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 BSCL2Q96G97 398 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-204ENST00000492601 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 C21orf62Q9NYP8 219 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 PRNDQ9UKY0 176 aa12.9□□□□□ -0.34
SGMS1-204ENST00000492601 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 S100GP29377 79 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 RCVRNP35243 200 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 RNASE12Q5GAN4 147 aaKnown RBP12.89□□□□□ -0.35
SGMS1-204ENST00000492601 LPCAT3Q6P1A2 487 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 TMEM56Q96MV1 263 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms