RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 HELZP42694 1942 aaKnown RBP17.7■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 CLDN18P56856 261 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 GNB1LQ9BYB4 327 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 MRPL37Q9BZE1 423 aaKnown RBP17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 MC5RP33032 325 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 SCNM1Q9BWG6 230 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 A8MWP6 167 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TIMP3P35625 211 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 SGK494Q96LW2 274 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 GP6Q9HCN6 339 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 MKRN2OSH3BPM6 223 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 ORM1P02763 201 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 LIPFP07098 398 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PSG7Q13046 419 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 LYPD6BQ8NI32 183 aa17.69■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 NPIPB3Q92617 1050 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TMEM30BQ3MIR4 351 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 HCP5Q6MZN7 132 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 RNASE7Q9H1E1 156 aaKnown RBP17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 IFI27L2Q9H2X8 130 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 OSTCQ9NRP0 149 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 OR2T8A6NH00 312 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PRR33A8MZF0 331 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 CEACAM3P40198 252 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TMEM256Q8N2U0 113 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 FOXA3P55318 350 aaPredicted RBP17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 ABCA7Q8IZY2 2146 aa17.68■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 A0A0G2JRQ6 117 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 DLEU1O43261 78 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PMCHL2Q9BQD1 86 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 DCTN5Q9BTE1 182 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 OR4C46A6NHA9 309 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 ZNF324O75467 553 aaPredicted RBP17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 ZNRF1Q8ND25 227 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PPIAL4EA0A075B759 164 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 A6NNC1 897 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PPIAL4DF5H284 164 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PPIAL4FP0DN26 164 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 LTBRP36941 435 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 OR10AG1Q8NH19 301 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PPIAL4AQ9Y536 164 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TRBV6-6A0A0A6YYG2 114 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 IQCF6A8MYZ5 107 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 GDF9O60383 454 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 OR10J3Q5JRS4 329 aa17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 RNASEH2CQ8TDP1 164 aaKnown RBP17.67■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 KRTCAP3Q53RY4 240 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TCTAP57738 103 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 CCL8P80075 99 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 DEPPQ9NTK1 212 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 CACNA1DQ01668 2161 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TMEM189A5PLL7 270 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PEX7O00628 323 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 GFRALQ6UXV0 394 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 Q6ZT83 130 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 LIME1Q9H400 295 aa17.66■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 STAG3L2P0CL84 134 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 STAG3L3P0CL85 134 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 LHX2P50458 406 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 ELOVL5Q9NYP7 299 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 CACNA1GO43497 2377 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 SMIM17P0DL12 118 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 FABP2P12104 132 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 GGNQ86UU5 652 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 SCGB1C2P0DMR2 95 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 TMEM144Q7Z5S9 345 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PHF3Q92576 2039 aaKnown RBP17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 LYRM7Q5U5X0 104 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 SRSF12Q8WXF0 261 aaKnown RBP17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PEF1Q9UBV8 284 aaKnown RBP17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 UFC1Q9Y3C8 167 aa17.65■□□□□ 0.42
CHKB-CPT1B-203ENST00000492556 PFN1P07737 140 aaKnown RBP17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 EFNB3Q15768 340 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 Q6ZRM9 215 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 COL4A6Q14031 1691 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 OR4C13Q8NGP0 309 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 NEU1Q99519 415 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 ETV2O00321 342 aaPredicted RBP17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 SLC25A17O43808 307 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 NUDT3O95989 172 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 OR9G9P0C7N8 305 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 TFPI2P48307 235 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 HOXA4Q00056 320 aaPredicted RBP17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 TREML4Q6UXN2 200 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 LINC00305Q7Z4B0 112 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 DERL1Q9BUN8 251 aa17.64■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 FAM90A9PA6NNJ1 464 aa17.63■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 TRIP6Q15654 476 aaKnown RBP17.63■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 ALKBH7Q9BT30 221 aaPredicted RBP17.63■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 EREGO14944 169 aa17.63■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 MRPL52Q86TS9 123 aaKnown RBP17.63■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 AHRRA9YTQ3 701 aa17.62■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 RBFOX2O43251 390 aaKnown RBP eCLIP17.62■□□□□ 0.413e-7■□□□□ 9.1
CHKB-CPT1B-203ENST00000492556 TMEM50AO95807 157 aa17.62■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 MMDQ15546 238 aa17.62■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 IGKV3D-15A0A087WSY6 115 aa17.62■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 CELA3BP08861 270 aa17.62■□□□□ 0.41
CHKB-CPT1B-203ENST00000492556 GATA2P23769 480 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms